Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02301 and BPUM_1261
See
DNA alignment /
Visit
BSNT_02301 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence pep-align/BSNT_02301.1.24716.seq
# -bsequence pep-align/BPUM_1261___clpE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02301-BPUM_1261___clpE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02301-BPUM_1261___clpE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02301
# 2: BPUM_1261___clpE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 700
# Identity: 465/700 (66.4%)
# Similarity: 533/700 (76.1%)
# Gaps: 103/700 (14.7%)
# Score: 2352.0
#
#
#=======================================
BSNT_02301 0 -------------------------------------------------- 0
BPUM_1261___c 1 MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFG 50
BSNT_02301 0 -------------------------------------------------- 0
BPUM_1261___c 51 GSSFFSEQAGHTQNVEQPKHKGLLDELGRNLTDGANAGLIDPVIGRDEEV 100
BSNT_02301 1 --MIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKEL 48
:||||||||||||||||||||||||||||||||||.||||||||||::
BPUM_1261___c 101 ARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQI 150
BSNT_02301 49 YLLDVASLVANTGIRGQFEERMKQLITELKERKNVILFIDEIHLLVGAGS 98
|||||:||||||||||||||||||||.||:.|||:|||:|||||||||||
BPUM_1261___c 151 YLLDVSSLVANTGIRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGS 200
BSNT_02301 99 AEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALERRFQPVMVQ 148
|||||||||||||||||||||::||||||||||||||||||||||||:|.
BPUM_1261___c 201 AEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAALERRFQPVIVD 250
BSNT_02301 149 EPSIEQAILILQGIKDKYEAYHGVTFSDEAIKACVTLSSRYIQDRHLPDK 198
||:..:||.||:||:||||:|||:|:|||||:|||.||||||||||||||
BPUM_1261___c 251 EPTQAEAIEILKGIQDKYESYHGITYSDEAIQACVQLSSRYIQDRHLPDK 300
BSNT_02301 199 AIDLLDEAGSKANLLIDELNDEDAAERLTAIEAEKTKALEEENYELAAKL 248
||||:|||||||||.||..::::...||:.|.|||..||:||.||.||||
BPUM_1261___c 301 AIDLMDEAGSKANLSIDAASEDELTNRLSEIAAEKQAALKEEQYEKAAKL 350
BSNT_02301 249 RDEELALEKKLNSSSAHTAVTVEAEHIQEIVEQKTGIPVGKLQADEQTKM 298
||||.|:|.:|.:.:.|....|.||.||.|||||||||||||||||||||
BPUM_1261___c 351 RDEEEAIEARLQNKTNHKEHVVTAEDIQAIVEQKTGIPVGKLQADEQTKM 400
BSNT_02301 299 KELEAKLHERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGV 348
||::.:|..||||||.||:||||||:|||||||||:||.|||||||||||
BPUM_1261___c 401 KEIDVRLKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGV 450
BSNT_02301 349 GKTELSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEA 398
||||||||||:||||:::||||||||||||||:|||:||||||||||:||
BPUM_1261___c 451 GKTELSKTLAEELFGSREAIIRLDMSEYMEKHSVSKLIGSPPGYVGHDEA 500
BSNT_02301 399 GQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSF 448
|||||||||.||||:|||||||||||||||||||||||||||||||||||
BPUM_1261___c 501 GQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSF 550
BSNT_02301 449 KDTVIIMTSNAGAGEKQTKVGFQSD-DSVIEEQTLIDSLSMFFKPEFLNR 497
||||||||||||:.:|..||||||| :..||||:||||||.:||||||||
BPUM_1261___c 551 KDTVIIMTSNAGSTDKTVKVGFQSDQEEAIEEQSLIDSLSAYFKPEFLNR 600
BSNT_02301 498 FDSIIEFRSLEKEHLVKIVSLLLGELEETLAERGISLNVTDEAKEKIAEL 547
|||||:|.||:::.|||||.|||.||...|.|:.::::||.|||||||||
BPUM_1261___c 601 FDSIIQFDSLDRDDLVKIVDLLLNELSAQLKEQNLTVHVTKEAKEKIAEL 650
BSNT_02301 548 GYHPSFGARPLRRTIQEWVEDEMTDLLLDNGEITSFHVILEDDKIKVQAK 597
||||:||||||||||||.|||:||::||:..::..|.|.:||::|.|:..
BPUM_1261___c 651 GYHPAFGARPLRRTIQEHVEDQMTEILLEEDKLLGFTVDVEDNEIVVKKG 700
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.