Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02290 and BPUM_1255
See
DNA alignment /
Visit
BSNT_02290 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence pep-align/BSNT_02290___ykrZ.1.24716.seq
# -bsequence pep-align/BPUM_1255___mtnZ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02290___ykrZ-BPUM_1255___mtnZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02290___ykrZ-BPUM_1255___mtnZ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02290___ykrZ
# 2: BPUM_1255___mtnZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 178
# Identity: 133/178 (74.7%)
# Similarity: 157/178 (88.2%)
# Gaps: 2/178 ( 1.1%)
# Score: 722.0
#
#
#=======================================
BSNT_02290___ 1 MATIRIHDEANTTIENQEEVASFLDSQEVIYEQWDIMKLPEHLSEKYDLT 50
||||.||:|.||.:|:::|||::|::|.||||.|||.|||..||||||||
BPUM_1255___m 1 MATILIHNEENTLLESEQEVAAYLENQGVIYEHWDIAKLPNRLSEKYDLT 50
BSNT_02290___ 51 EEEKQQILDTFETEIKDISTRRGYKAQDVISLSDSNPKLDELLENFKREH 100
:|||.:||..|:.||:.||.:||||:||||||||:.|.||:||:||:|||
BPUM_1255___m 51 DEEKDEILTVFQKEIESISEKRGYKSQDVISLSDATPNLDDLLQNFQREH 100
BSNT_02290___ 101 HHTDDEVRFIVSGHGIFVIQGKDGTFFDVRLNPGDLISVPENIRHYFTLQ 150
|||||||||||||||||.||||||.|||||||||||||||.:||||||||
BPUM_1255___m 101 HHTDDEVRFIVSGHGIFAIQGKDGVFFDVRLNPGDLISVPPHIRHYFTLQ 150
BSNT_02290___ 151 EDRKVVAVRIFVTTEGWVPIYEKDSVNQ 178
||||||:|||||||||||||||:::|
BPUM_1255___m 151 EDRKVVSVRIFVTTEGWVPIYEEETV-- 176
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.