Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02268 and BPUM_1240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:43
# Commandline: needle
# -asequence pep-align/BSNT_02268___ykrK.1.24716.seq
# -bsequence pep-align/BPUM_1240.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02268___ykrK-BPUM_1240.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02268___ykrK-BPUM_1240.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02268___ykrK
# 2: BPUM_1240
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity: 143/241 (59.3%)
# Similarity: 180/241 (74.7%)
# Gaps: 12/241 ( 5.0%)
# Score: 723.0
#
#
#=======================================
BSNT_02268___ 1 MNIFKLSRTDMVRLLYSLKGQGEHSPLDILVQSANMSAEKAANH----LE 46
|..|||:|.||..|||||||:|:.:||.:| |:|.:|..:| |.
BPUM_1240 1 MGAFKLTRIDMTSLLYSLKGEGDLTPLQLL----NLSVKKDKHHELDELI 46
BSNT_02268___ 47 IPEFLTRYERKKQKKEYGLSTNEIVELGNLCELTSLKSTAIQNWVKRDIK 96
||.|..|.||:|||.|:|||||||||||||||||||||||||||:|||||
BPUM_1240 47 IPSFFERLERRKQKSEHGLSTNEIVELGNLCELTSLKSTAIQNWIKRDIK 96
BSNT_02268___ 97 DLIGHPELGKKYSIEQAVILLIVRDLKSIYDFEHIRAILKVAFNTISDRS 146
|:||||||||||||:|.|||||||||||::||:.||.||...||||:||:
BPUM_1240 97 DMIGHPELGKKYSIDQVVILLIVRDLKSVFDFDAIRTILSALFNTITDRT 146
BSNT_02268___ 147 DDVISPIAYYESCAYVLDAIHHQDTPSMKESNLQEIAEQETERLRHRFEE 196
||:|||:.:||:.|:|||.|:|.....:||:||:||.|.:|::||..|.|
BPUM_1240 147 DDIISPLRFYEAYAHVLDFIYHHTPFPLKETNLREITEVQTDKLREEFAE 196
BSNT_02268___ 197 LNDSQWLKIRQIIAITVLSILTFHIQATAHKMTADIL---- 233
|:..||..|:.||:.||.|:.|.|:|:||.:|....|
BPUM_1240 197 LSQHQWRLIKGIISSTVFSVFTSHLQSTAQEMMFHTLQHQD 237
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