Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02264 and BPUM_1237

See DNA alignment / Visit BSNT_02264 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence pep-align/BSNT_02264___sigI.1.24716.seq
#    -bsequence pep-align/BPUM_1237___sigI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02264___sigI-BPUM_1237___sigI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02264___sigI-BPUM_1237___sigI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02264___sigI
# 2: BPUM_1237___sigI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     199/251 (79.3%)
# Similarity:   227/251 (90.4%)
# Gaps:           0/251 ( 0.0%)
# Score: 997.0
# 
#
#=======================================

BSNT_02264___      1 MKPVLSLLFKLGKKKQTLEKAVESIQKGNKDLQNELIQQYKPFIAKTVSS     50
                     |||:||||||.||||||||::..|||:|:.:|||.||:|||||:||||||
BPUM_1237___s      1 MKPLLSLLFKKGKKKQTLEQSAISIQQGDTELQNALIEQYKPFVAKTVSS     50

BSNT_02264___     51 VCKRYIDEKDDEFSIGLIAFNEAIEKYSPEKGNSLLAFAELIIKRKVIDY    100
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BPUM_1237___s     51 VCKRYIDEKDDEFSIGLIAFNEAIEKYSAEKGNSLLAFAELIIKRKVIDY    100

BSNT_02264___    101 IRKEARSAQNINIDLQEGDDQESSQSLIEAELSIDEYRRQIEQEQRREEI    150
                     ||||||:|..:.:||||.::.|.|||:||||||.:||||.||||.|||||
BPUM_1237___s    101 IRKEARNAPTVQMDLQESENGEYSQSMIEAELSTNEYRRLIEQEHRREEI    150

BSNT_02264___    151 LYFQKQLKDYGLSFKELLENSPKHTDARQNAIKVAMTLVEHEELAAILYT    200
                     .:|:::||.|||:|:||||:||||.||||||||||.|||||:||..||:.
BPUM_1237___s    151 EHFKERLKVYGLTFQELLEHSPKHADARQNAIKVAHTLVEHDELRTILFQ    200

BSNT_02264___    201 KKQLPVKQLEQLVSVSRKTIERNRKYIIAMCIIITGDYIYLKDYLKGVLH    250
                     ||||||||||:||.||||||||||||||||.||:||||:||||||||||:
BPUM_1237___s    201 KKQLPVKQLEKLVEVSRKTIERNRKYIIAMAIIMTGDYVYLKDYLKGVLN    250

BSNT_02264___    251 S    251
                     |
BPUM_1237___s    251 S    251


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