Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02230 and BPUM_1220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:41
# Commandline: needle
# -asequence pep-align/BSNT_02230___ykoH.1.24716.seq
# -bsequence pep-align/BPUM_1220___ykoH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02230___ykoH-BPUM_1220___ykoH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02230___ykoH-BPUM_1220___ykoH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02230___ykoH
# 2: BPUM_1220___ykoH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity: 240/456 (52.6%)
# Similarity: 335/456 (73.5%)
# Gaps: 9/456 ( 2.0%)
# Score: 1254.5
#
#
#=======================================
BSNT_02230___ 1 MKLKTKIHLYTSISLLILLILVHTAVYLIFSSALTSKDAARLADETDNIA 50
|:||.||.||||:||.::::|.|||:|.|||..||.||.:||::..:|||
BPUM_1220___y 1 MRLKNKIQLYTSLSLFLMVLLFHTAIYFIFSITLTQKDMSRLSEVAENIA 50
BSNT_02230___ 51 EALRAAETEGVALQDMLQAYLPANGMVRVVNGDQKAVMTITKEKAYKDFP 100
.||:.:|.||:...::|:||||.|||:|||....::.:|:|||..:...|
BPUM_1220___y 51 IALKKSEEEGLPSSELLKAYLPQNGMIRVVTETDESKLTVTKESTFSSLP 100
BSNT_02230___ 101 LSFHSGETADVRKHDGKLFAEAAVPVIWTDGQVVSLQLVERLENTEESLF 150
.|:.||:||::::::..:.|.||:|||||:|::||||:.|.:|||||:|.
BPUM_1220___y 101 FSYESGQTAEIKEYNKHMVAFAAIPVIWTNGEIVSLQVYEEIENTEENLA 150
BSNT_02230___ 151 LLKIILIAASAAVCIASFFAGSLLARRIINPIRRLMITMKDIQRDKEFKT 200
|||:||:||.....:.|:|||.:|.::|:.||.|:..|||...::|.||.
BPUM_1220___y 151 LLKMILMAAGVLFIVLSYFAGHILTKQIVRPISRMTSTMKASMKEKAFKR 200
BSNT_02230___ 201 ISLEEQSNDELYQMGLTFNEMAMMLKEHYDKQQQFVQDASHELKTPLTII 250
|.|...|.|||||||.|||||:.:|::||:|:|||:.|||||||||:|:|
BPUM_1220___y 201 IELTGDSKDELYQMGQTFNEMSEILEKHYEKEQQFLHDASHELKTPITVI 250
BSNT_02230___ 251 ESYSSLMKRWGAKKPEVLEESIEAIHSEAVHMKKLTNQLLALAKSHQGLE 300
.|||.|:||||..:|||:|||.:|||.||..||:||:|||.|||:.|.|.
BPUM_1220___y 251 MSYSHLLKRWGQTRPEVVEESSQAIHDEAEKMKRLTDQLLTLAKNGQPLY 300
BSNT_02230___ 301 VDLKTIDLIKAARAVMQTLQSVYQRDI--LLETDKESLLVKADEERIKQL 348
||:|.:||......:..||:....|.| .::|| :.|:.:.|||:||||
BPUM_1220___y 301 VDMKPVDLGHMCNQLCHTLEVATNRTIQSRVQTD-QPLIAEGDEEKIKQL 349
BSNT_02230___ 349 LTILLDNAIKYSEKPIEMSAGTRNGRPFLSVRDEGIGIPEEHIPHLFERF 398
||||:|||:|||..|::::.|.:..|||:||.|.||||.||.:|.:|:||
BPUM_1220___y 350 LTILIDNAVKYSTAPVDVTCGWKEERPFISVGDHGIGIKEEDLPKIFDRF 399
BSNT_02230___ 399 YRADEARNRKTGGTGLGLSIAKQIADEHGIELSVKSKPGQGTAVTMQFSE 448
:|.|||||.:|||||||||||||||:|||.||.|.|:.|:||.:|:.|.:
BPUM_1220___y 400 FRVDEARNSETGGTGLGLSIAKQIAEEHGAELKVDSRIGEGTTMTILFPK 449
BSNT_02230___ 449 QNGGGR 454
BPUM_1220___y 449 ------ 449
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