Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02201 and BPUM_1202

See DNA alignment / Visit BSNT_02201 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence pep-align/BSNT_02201___ykkC.1.24716.seq
#    -bsequence pep-align/BPUM_1202.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02201___ykkC-BPUM_1202.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02201___ykkC-BPUM_1202.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02201___ykkC
# 2: BPUM_1202
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:      70/114 (61.4%)
# Similarity:    84/114 (73.7%)
# Gaps:           7/114 ( 6.1%)
# Score: 317.5
# 
#
#=======================================

BSNT_02201___      1 MKWGLVVLAAVFEVVWVIGLKHADSALTWSGTAIGIIFSFYLLIKATHSL     50
                     ||||.|.:||:|||.||:|||:|:|.:.|..|.:.||.|||||:|||..|
BPUM_1202          1 MKWGNVFIAAIFEVGWVMGLKYANSLIEWGATIVCIIVSFYLLMKATSVL     50

BSNT_02201___     51 PVGTVYAVFSGLGTAGTVLSEIVLFHEPVGWPKLLLIGVLLIGVIGLKLV    100
                     ||||:||||:||||||||:..:|| .|||...|||||.:||.||:||||.
BPUM_1202         51 PVGTLYAVFTGLGTAGTVVIGMVL-GEPVQLVKLLLIVMLLCGVLGLKLT     99

BSNT_02201___    101 TQDETEEKGGEA--    112
                         |.||.|||  
BPUM_1202        100 ----TGEKKGEAES    109


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