Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02195 and BPUM_1194

See DNA alignment / Visit BSNT_02195 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:39
# Commandline: needle
#    -asequence pep-align/BSNT_02195___ykhA.1.24716.seq
#    -bsequence pep-align/BPUM_1194.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02195___ykhA-BPUM_1194.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02195___ykhA-BPUM_1194.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02195___ykhA
# 2: BPUM_1194
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity:     142/174 (81.6%)
# Similarity:   157/174 (90.2%)
# Gaps:           2/174 ( 1.1%)
# Score: 733.0
# 
#
#=======================================

BSNT_02195___      1 -METPETRFCKESKVVKTSRVFPLDTNNHNTLFGGKLMSYIDDIASISAA     49
                      |.....::||||||||||||||||||||.||||||||||||||||||||
BPUM_1194          1 MMSEENFKYCKESKVVKTSRVFPLDTNNHQTLFGGKLMSYIDDIASISAA     50

BSNT_02195___     50 RHCRRETVTASMDSVDFLKPIGQKDSVCLESYVTWVGTSSMEVFVKVIKE     99
                     ||.|.|||||||||||||:|||||:||||||||||||||||||||||:||
BPUM_1194         51 RHSRSETVTASMDSVDFLEPIGQKESVCLESYVTWVGTSSMEVFVKVMKE    100

BSNT_02195___    100 HLMTGERELAATSFLTFVALDSNGKPVPVPRVVPETEEEIMLHNTAVQRA    149
                     :||:|||.||||||||||:||.:|||..||:|:||||||||||.||.|||
BPUM_1194        101 NLMSGERRLAATSFLTFVSLDEDGKPKRVPQVMPETEEEIMLHQTAKQRA    150

BSNT_02195___    150 NERKNRKKHSQALANALGTDKPW-    172
                     .|||:|:|||:|||:|||||||| 
BPUM_1194        151 EERKSRRKHSKALADALGTDKPWA    174


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