Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02183 and BPUM_1186

See DNA alignment / Visit BSNT_02183 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence pep-align/BSNT_02183___dppC.1.24716.seq
#    -bsequence pep-align/BPUM_1186___dppC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02183___dppC-BPUM_1186___dppC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02183___dppC-BPUM_1186___dppC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02183___dppC
# 2: BPUM_1186___dppC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     251/322 (78.0%)
# Similarity:   284/322 (88.2%)
# Gaps:           4/322 ( 1.2%)
# Score: 1326.0
# 
#
#=======================================

BSNT_02183___      1 MNLPVQTDERQPEQHNQVPDEWFVSNQEKNREADSVKRPSLSYTQDAWRR     50
                     |::.:|.|::.|  |.:|||:||...::|..||.::|||||||..|.|||
BPUM_1186___d      1 MSIHLQQDQQNP--HPEVPDDWFSPREQKKMEAHAIKRPSLSYWADTWRR     48

BSNT_02183___     51 LKKNKLAMAGLFILLFLFVMTVIGPFLSPHSVVRQSLTEQNLPPSADHWF    100
                     ||:|||||..|.:|:|||:|.::||.|:|:||..|.|:.|||||||.|||
BPUM_1186___d     49 LKQNKLAMFSLSVLIFLFIMALLGPLLAPNSVTEQRLSMQNLPPSAAHWF     98

BSNT_02183___    101 GTDELGRDVFTRTWYGARISLFVGVMAALIDFLIGVIYGGVAGYKGGRID    150
                     ||||||||||||||||||||||||||||||||.|||||||:|||||||.|
BPUM_1186___d     99 GTDELGRDVFTRTWYGARISLFVGVMAALIDFAIGVIYGGIAGYKGGRYD    148

BSNT_02183___    151 SIMMRIIEVLYGLPYLLVVILLMVLMGPGLGTIIVALTVTGWVGMARIVR    200
                     .:||||:|||||||||||||||||||||||.|||||||||||:|||||||
BPUM_1186___d    149 HVMMRIVEVLYGLPYLLVVILLMVLMGPGLVTIIVALTVTGWIGMARIVR    198

BSNT_02183___    201 GQVLQIKNYEYVLASKTFGAKTFRIIRKNLLPNTMGAIIVQMTLTVPAAI    250
                     |||||:|:.||||||||||||:.||||:||||||||.||||||||||.||
BPUM_1186___d    199 GQVLQLKSQEYVLASKTFGAKSLRIIRRNLLPNTMGPIIVQMTLTVPTAI    248

BSNT_02183___    251 FAESFLSFLGLGIQAPFASWGVMANDGLPTILS--GHWWRLFFPAFFISL    298
                     |||:||||||||||||||||||||||.|||:||  |||||||||||||||
BPUM_1186___d    249 FAEAFLSFLGLGIQAPFASWGVMANDALPTVLSDNGHWWRLFFPAFFISL    298

BSNT_02183___    299 TMYAFNVLGDGLQDALDPKLRR    320
                     ||:.||.||||||||||||::|
BPUM_1186___d    299 TMFCFNNLGDGLQDALDPKMKR    320


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