Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02179 and BPUM_1181
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence pep-align/BSNT_02179___htrA.1.24716.seq
# -bsequence pep-align/BPUM_1181___htrA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02179___htrA-BPUM_1181___htrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02179___htrA-BPUM_1181___htrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02179___htrA
# 2: BPUM_1181___htrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 461
# Identity: 269/461 (58.4%)
# Similarity: 341/461 (74.0%)
# Gaps: 34/461 ( 7.4%)
# Score: 1332.0
#
#
#=======================================
BSNT_02179___ 1 MMDNYRDENRTKGNENEVFLTKENDQSASYSARNVIHDQEKKKRGFGWFR 50
|.:::.||: .|:..:.:...|::||:..|||:
BPUM_1181___h 1 -MTHHKHENQ-----------------PSHEIQTLKQPQKQKKKPNGWFK 32
BSNT_02179___ 51 PLLGGVIGGSLALGIYTFTPLGDHDSQDTAKQSSSQQQTQSVTATSTSSE 100
|.:.||:||.||||:|..||...|.|.:|| |:|..:|:||:...||:.
BPUM_1181___h 33 PFVSGVVGGILALGVYVLTPYAQHASDNTA--SNSATKTESVSTNDTSAN 80
BSNT_02179___ 101 SKKSSSSSSAFKSEDSSKISDMVEDLSPAIVGITNLQAQSNSSL-FG--- 146
|.|:::..: |..|:.||.||||:|||||||||.||||.:.: ||
BPUM_1181___h 81 SSKTTAVQT---SHSSNNISSMVEDVSPAIVGITNYQAQSQTDMSFGDFN 127
BSNT_02179___ 147 -----SSSSDSSEDTESGSGSGVIFKKENGKAYIITNNHVVEGASSLKVS 191
|..:.||::.::|:||||||||...|||::|||||:|||:.|.||
BPUM_1181___h 128 TPFDESQQNKSSQEEKTGTGSGVIFKKSGSKAYVLTNNHVIEGANKLTVS 177
BSNT_02179___ 192 LYDGTEVTAKLVGSDSLTDLAVLQISDDHVTKVANFGDSSDLRTGETVIA 241
|:||.....||||:|.||||||::||..||||||..||||.||.||||||
BPUM_1181___h 178 LHDGKTTKGKLVGADPLTDLAVVEISSSHVTKVAALGDSSSLRAGETVIA 227
BSNT_02179___ 242 IGDPLGKDLSRTVTQGIVSGVDRTVSMSTSAGETSINVIQTDAAINPGNS 291
||:|||:||||||||||||||||||||:|||||:||||||||||||||||
BPUM_1181___h 228 IGNPLGEDLSRTVTQGIVSGVDRTVSMNTSAGESSINVIQTDAAINPGNS 277
BSNT_02179___ 292 GGPLLNTDGKIVGINSMKISEDDVEGIGFAIPSNDVKPIAEELLSKGQIE 341
|||||.|:||:|||.||||||..|||||||:|.|||||||::||:||:||
BPUM_1181___h 278 GGPLLTTNGKVVGITSMKISETGVEGIGFALPINDVKPIADQLLTKGKIE 327
BSNT_02179___ 342 RPYIGVSMLDLEQVPQNYQEGTLGLFGSQLNKGVYIREVASGSPAEKAGL 391
|||||:|||||||||..||:.||||..|||::|||::|:|:||||.||||
BPUM_1181___h 328 RPYIGISMLDLEQVPDVYQKETLGLKNSQLDQGVYVKEIAAGSPAAKAGL 377
BSNT_02179___ 392 KAEDIIIGLKGKEIDTGSELRNILYKDAKIGETVEVKILRNGKEMTKKIK 441
|:||::..:.||:|..|||||:.||.:.||||||.:.::|||||.|||:.
BPUM_1181___h 378 KSEDVMTAINGKQIKNGSELRHELYTNTKIGETVSITLIRNGKEETKKVT 427
BSNT_02179___ 442 LDQKEEKTS-- 450
|.|.|.|..
BPUM_1181___h 428 LTQTESKQVSS 438
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