Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01737 and BPUM_1163

See DNA alignment / Visit BSNT_01737 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:14
# Commandline: needle
#    -asequence pep-align/BSNT_01737___yhfF.1.24716.seq
#    -bsequence pep-align/BPUM_1163.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01737___yhfF-BPUM_1163.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01737___yhfF-BPUM_1163.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01737___yhfF
# 2: BPUM_1163
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:      42/159 (26.4%)
# Similarity:    64/159 (40.3%)
# Gaps:          31/159 (19.5%)
# Score: 151.0
# 
#
#=======================================

BSNT_01737___      1 MKIYKLKSTFGWE---------------------GDDGLGEQLIQQILAG     29
                        ...|||..||                     |.|  .:.|:..:|.|
BPUM_1163          1 ---MNQKSTLFWETYWKEKLESAPIDASVSAWAFGAD--PDHLLDLVLQG     45

BSNT_01737___     30 EKTATCAPKSLYSKDELRDVYQTAGQLVTVYDKHDNPRCNIKVTDVFETT     79
                     :|||||:....|.|::  :....|||...:.|.||.|:..|::|.|....
BPUM_1163         46 KKTATCSGHLFYEKEQ--EPLPKAGQYAVILDSHDEPKAIIEITHVDVMP     93

BSNT_01737___     80 FGAPDMRLVKGEGNGDRIAEF-HEDHRMAWAELIKSGELELNEDTVLITE    128
                     .........:.||.||...:: :..|:..:.|.::...||..||.:|:.|
BPUM_1163         94 MNEVPESFARAEGEGDLSYQYWYRAHQEFFTEALEPYGLEFKEDMLLVCE    143

BSNT_01737___    129 LFVLVKD--    135
                     .|.||..  
BPUM_1163        144 RFKLVYSAS    152


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