Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01978 and BPUM_1117
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence pep-align/BSNT_01978___yjcG.1.24716.seq
# -bsequence pep-align/BPUM_1117___ligT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01978___yjcG-BPUM_1117___ligT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01978___yjcG-BPUM_1117___ligT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01978___yjcG
# 2: BPUM_1117___ligT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 171
# Identity: 118/171 (69.0%)
# Similarity: 139/171 (81.3%)
# Gaps: 0/171 ( 0.0%)
# Score: 635.0
#
#
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BSNT_01978___ 1 MKYGIVLFPSKKLQDLANSYRKRYDPSYSLIPPHLTLRASFECAEEKADQ 50
||||:||||||||||:||||||||||:|:|||||||||..||..:.:|.:
BPUM_1117___l 1 MKYGVVLFPSKKLQDIANSYRKRYDPNYALIPPHLTLRTPFELTDLEAAE 50
BSNT_01978___ 51 LVSHLRNIAKESHPLVLKMTKYSSFAPVNNVIYIKAEPTEELKTLNEKLY 100
:||.||..||.:.|:.|::.|:|||||||||||:|.||.||:..|||:||
BPUM_1117___l 51 VVSTLREYAKNASPITLRIKKFSSFAPVNNVIYMKVEPNEEIMALNERLY 100
BSNT_01978___ 101 TGVLAGEQEYNFVPHVTVGQNLSDDEHSDVLGQLKMQEVSHEEIVDRFHL 150
...|.|..||.|||||||.|.|||||||||||.||::::.|||.||||||
BPUM_1117___l 101 ADPLEGTPEYAFVPHVTVAQKLSDDEHSDVLGTLKLRKIDHEETVDRFHL 150
BSNT_01978___ 151 LYQLENGSWTVYETFLLGRGE 171
|||||||||||||||:||...
BPUM_1117___l 151 LYQLENGSWTVYETFILGEEG 171
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