Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01975 and BPUM_1114

See DNA alignment / Visit BSNT_01975 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_01975___yjcD.1.24716.seq
#    -bsequence pep-align/BPUM_1114___yjcD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01975___yjcD-BPUM_1114___yjcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01975___yjcD-BPUM_1114___yjcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01975___yjcD
# 2: BPUM_1114___yjcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 773
# Identity:     460/773 (59.5%)
# Similarity:   591/773 (76.5%)
# Gaps:          17/773 ( 2.2%)
# Score: 2436.5
# 
#
#=======================================

BSNT_01975___      1 MKCARLNDRIIHLHTYSREHYQFLFEEGIKGHLFCSHCGKPVLLRLNIAD     50
                     |||||.:||.|.||||||||||||.:||.||||||.:||:||..||||.:
BPUM_1114___y      1 MKCARRHDRTISLHTYSREHYQFLHDEGKKGHLFCPYCGQPVFFRLNIHE     50

BSNT_01975___     51 PPEFIHRQPGDFPACEEACEPKPSKE--EKKEDD--QESGVIRLPKGKAI     96
                     .|.|||:.......||:|.|.:..|:  |:||..  :|.|..|.|.||.|
BPUM_1114___y     51 EPAFIHKHMSQQEICEQAEEQEVQKKHAEQKESASYKERGGFRFPTGKQI    100

BSNT_01975___     97 AADPSPAVTEWHRPRSIK-PGTPFVPKTIEPDT-SLFPSVGLNTDQLKAV    144
                     .:..:.:. ||..||||: .....:.:..:..| .|||.:..:|.||:||
BPUM_1114___y    101 ISQTNDSY-EWLEPRSIQFSDALHLEENEQAHTIDLFPHITFSTPQLQAV    149

BSNT_01975___    145 TETEGPLLVLAGAGSGKTRVLTARAAHMIEHLGIPPENMLLVTFTTKAVA    194
                     |..:||:|||||||||||||||||||:::.|..||..::|||||||||.:
BPUM_1114___y    150 THKDGPMLVLAGAGSGKTRVLTARAAYLMSHHHIPAHHILLVTFTTKASS    199

BSNT_01975___    195 EMKERMANQYGLQPAKVRRLVTGTFHSLFYKILYHSNSAKWNGEHLLKME    244
                     |||||:..||.|.|::..::|||||||||||:|.|.::.||||:||:|.:
BPUM_1114___y    200 EMKERLRKQYQLHPSQASQVVTGTFHSLFYKMLLHDDANKWNGQHLIKFD    249

BSNT_01975___    245 WQREQYIKKALYEEGIDEKEFPVDQALQQIGFWKNTYVPNERIPLKDEWE    294
                     ||:||||:||:..||:|||::|.||.||.||:|||.::|.:...||||.|
BPUM_1114___y    250 WQKEQYIRKAIMNEGLDEKDYPTDQVLQSIGYWKNAFLPGDLPDLKDEKE    299

BSNT_01975___    295 KQVYRLYEHYERQKKEHSQFDFDDMASACYELFIERPDLLEQYQSRFTYI    344
                     |.::.:|:.||:||:::.||||||||.||..:..|:|:||::||.||.||
BPUM_1114___y    300 KHMWTIYQSYEQQKRDNQQFDFDDMAIACLHMLTEQPELLKRYQDRFQYI    349

BSNT_01975___    345 LIDEFQDINPVQYKIMQMLASPEQNLCCVGDDDQSIYAFRGSNPSFILDF    394
                     |:|||||||||||:::|:||...:.|.|||||||:|||||||||:|||:|
BPUM_1114___y    350 LVDEFQDINPVQYQLIQLLAGESEQLFCVGDDDQAIYAFRGSNPAFILEF    399

BSNT_01975___    395 QKDYPGAKTIYLTANYRSTHPIVSSADIVVKKNKNRYAKTLEAARDDIQV    444
                     ::|||.|:.::|.|||||.|.||:|||.::|||::||.|||:|.|.:...
BPUM_1114___y    400 KRDYPSAQIVHLHANYRSHHTIVASADAIIKKNQHRYEKTLKAVRSETIP    449

BSNT_01975___    445 PVLFYPYDEEEEATMVVSDIKEKIQNGASPEDFAVLYRTNSGGRAIYERL    494
                     |.|||||||||||||:|:||:|||:|||.|.|..||:|||:|||||||||
BPUM_1114___y    450 PTLFYPYDEEEEATMIVADIQEKIKNGAKPNDICVLFRTNTGGRAIYERL    499

BSNT_01975___    495 HQSSIPYTADRGVQSFYSRRIVRQILAYLYASQNEDDTEAIKHLLPALFL    544
                     |||:|||..:.||::||||||||.:||:|..||:.||..|:|.|||..||
BPUM_1114___y    500 HQSAIPYETEAGVKAFYSRRIVRVLLAFLSLSQDADDVAAMKQLLPVFFL    549

BSNT_01975___    545 KQSALNTLKALSITEDCTMIKALAKLPDLKPFQLDKIKKIVPFFASLRTM    594
                     ||..|||:|||:|||||:|:.||.||.|::|||..|::.|||.|.:||.:
BPUM_1114___y    550 KQQTLNTMKALTITEDCSMVDALGKLTDIQPFQQKKLQSIVPLFRTLRNL    599

BSNT_01975___    595 KPVEAITFAEGKMGFSEYLKKRGNEGNKLEKGSDDLRDIKVVAKKFKTIP    644
                     ||.:|:.|.|.|||..:|||||.|:.|.||||:||:||:|..||:|:||.
BPUM_1114___y    600 KPSDAVAFIEQKMGLGDYLKKRVNDTNVLEKGTDDVRDVKTAAKRFETIE    649

BSNT_01975___    645 DFLAHVDHMRAAEKNRTDEHGVQLMTIHRSKGLEFKTVYVLGTVDGSIPH    694
                     .||||.:||::|||.:|||.|||||||||:|||||:|||:...|||::||
BPUM_1114___y    650 AFLAHAEHMKSAEKEKTDEPGVQLMTIHRAKGLEFQTVYITCVVDGALPH    699

BSNT_01975___    695 DFSLETARKGDEAALEEERRLLYVAMTRAKQHLYLSCPANRRGKTANRSR    744
                     ||||:..|.|||.||||||||||||||||:|.||||.|:.||||||:|||
BPUM_1114___y    700 DFSLDELRNGDEEALEEERRLLYVAMTRAEQSLYLSVPSFRRGKTAHRSR    749

BSNT_01975___    745 FLYPLLQKAR--------QPLHH    759
                     ||||||:|.|        .||  
BPUM_1114___y    750 FLYPLLKKNRALFTEKQQAPL--    770


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01975 and BPUM_1114

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
