Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01933 and BPUM_1084

See DNA alignment / Visit BSNT_01933 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence pep-align/BSNT_01933___yjbH.1.24716.seq
#    -bsequence pep-align/BPUM_1084___yjbH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01933___yjbH-BPUM_1084___yjbH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01933___yjbH-BPUM_1084___yjbH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01933___yjbH
# 2: BPUM_1084___yjbH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     186/306 (60.8%)
# Similarity:   241/306 (78.8%)
# Gaps:          10/306 ( 3.3%)
# Score: 983.5
# 
#
#=======================================

BSNT_01933___      1 MTNYQHELYFAHCHGHPKKPLEIYMFVDPLCPECWSLEPVIKKLKIRYGR     50
                     |:...|:.||:||||||:||:|||:|:|||.|:||.|||.|||||::|||
BPUM_1084___y      1 MSCNTHDQYFSHCHGHPQKPIEIYVFIDPLSPDCWLLEPSIKKLKMKYGR     50

BSNT_01933___     51 FFTLRIIASASLTALNKKRKKHLLAEAWEKIASRSGMSCDGNVWFEQDQP    100
                     |||||.:.|:|:.|||:|||||||.|||.|.|:::....:..:   .:|.
BPUM_1084___y     51 FFTLRTVTSSSINALNRKRKKHLLTEAWGKFATKTQTKKEQML---SEQI     97

BSNT_01933___    101 LSSPYMAALAFKAAELQGRKAGMQFLRNMQESLFVSKKNITDENVLLEIA    150
                     ::|||:|:||.|||||||||.||:|||.:|||||..::::|.|:||||.|
BPUM_1084___y     98 VTSPYLASLALKAAELQGRKCGMKFLRLIQESLFCHQQDVTSEHVLLENA    147

BSNT_01933___    151 ENTSLDLEEFKKDLHSQSAVKALQCDMKIAAEMDVSVNPTLTFFNTQHED    200
                     ::..||:|||::|:|||||||||:||||||||||||..||..||||.:.|
BPUM_1084___y    148 KSAGLDIEEFQRDIHSQSAVKALKCDMKIAAEMDVSELPTFAFFNTVNGD    197

BSNT_01933___    201 EGLKVPGSYSYDVYEEILFEMLGDEPKPSETPPLECFIEYFRFVASKEIA    250
                     ||||:.|:|||||||||||||:|::|.|||.||:|.||.||:|.::||||
BPUM_1084___y    198 EGLKISGAYSYDVYEEILFEMIGEKPTPSERPPIEWFIAYFQFASAKEIA    247

BSNT_01933___    251 LVYDLSLEEVEKEMKKLAFAKKVAKVEAKHGMFW--KSLSTYSD-EYQSC    297
                     :||||:|||||:|||||||||||.:|:....|||  |....:|| :...|
BPUM_1084___y    248 VVYDLTLEEVEREMKKLAFAKKVERVQVHQEMFWRYKEDDHHSDLDVYRC    297

BSNT_01933___    298 EK----    299
                     |.    
BPUM_1084___y    298 ENEHGC    303


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