Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01929 and BPUM_1081
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence pep-align/BSNT_01929___yjbF.1.24716.seq
# -bsequence pep-align/BPUM_1081___yjbF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01929___yjbF-BPUM_1081___yjbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01929___yjbF-BPUM_1081___yjbF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01929___yjbF
# 2: BPUM_1081___yjbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 391
# Identity: 137/391 (35.0%)
# Similarity: 217/391 (55.5%)
# Gaps: 13/391 ( 3.3%)
# Score: 629.0
#
#
#=======================================
BSNT_01929___ 1 MFSAVTEDGQMF---HLLGAQQNQKLKRR-RFFCPVCGGELAVKLGLQKA 46
|.:|:.::|::. |||...:.:.::.. :|:||.|..|:.:|||.|:.
BPUM_1081___y 1 MNTAIMDNGKLIRITHLLSKNRLEHVRATCKFYCPECREEVQLKLGEQRV 50
BSNT_01929___ 47 PHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEPYIRTIN 96
.||||||..:|.: ...|:|||..||..:..||:.....|:||.|:..::
BPUM_1081___y 51 YHFAHKQLTACPL-ASGETAYHQAGKEAIMNWLQRLGHKPVLEKYVSKVH 99
BSNT_01929___ 97 QRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSR 146
|||||...|.....|:||||:.|:....:|||.|.:|.|..|.||:|.:|
BPUM_1081___y 100 QRPDVAVSIGGTSYAIEYQCSNISRQELRKRTAGLRQAGHFPIWIIGANR 149
BSNT_01929___ 147 LKRTASSFYQLSAFHWQFINASPYRELICYCPERRSFLRLSHIIPFYTNH 196
|||.::..:..|:.||..:..|....||.|||.:..|:.|:..:.|....
BPUM_1081___y 150 LKRKSAQLFSFSSIHWGMLRESQKGSLIFYCPLQNRFIHLAQFLVFQPTK 199
BSNT_01929___ 197 --SYSSVQTIPIHRAGADDLFFTEPKPSIQYS-GWTKAIHRFRHKPHRFN 243
:..:|::...:|..:|.| ::|....|.| .|.:.|.:||.:|.|..
BPUM_1081___y 200 ICAAITVRSPTAYRQFSDIL--SQPSSKRQVSTQWLRCIQQFRQRPPRIL 247
BSNT_01929___ 244 SKEINRLRLLFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLF 293
|.|..|||.:|||..||:|.|||.|:|:|:||..:|.|||:||||.||.:
BPUM_1081___y 248 SNESKRLRDVFYEHHQTAFPFLPAELFIPLRKAYIFTSPVYVWQGCLYDW 297
BSNT_01929___ 294 MTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRF-ECSEECLSEAVKQYID 342
|....|. :|:....::::.|..|..|.:.||: :.|.|.:.|.:..|:.
BPUM_1081___y 298 MIRKKGS-SPVTIQLLMKEIKRCIEMKGVKLRYGDVSIEEIKEVITSYVH 346
BSNT_01929___ 343 FLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE 383
.|.::||||.|::..|.:......|.::.:..:||...|.
BPUM_1081___y 347 ALVRQGFLRMTKEGNYEVASNQKPIQTVDEAFKRDAFLFH- 386
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