Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_01914 and BPUM_1070

See DNA alignment / Visit BSNT_01914 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence pep-align/BSNT_01914___oppA.1.24716.seq
#    -bsequence pep-align/BPUM_1070.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01914___oppA-BPUM_1070.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01914___oppA-BPUM_1070.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01914___oppA
# 2: BPUM_1070
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 588
# Identity:     188/588 (32.0%)
# Similarity:   297/588 (50.5%)
# Gaps:          79/588 (13.4%)
# Score: 714.5
# 
#
#=======================================

BSNT_01914___      1 MKKRWSIVTLMLIFTLVL----SACGFGGSGSNGEGKKDSKGKTTLNINI     46
                     |||  |..:|:|:|.|||    |||....|...|...||||.:.|:   :
BPUM_1070          1 MKK--SKFSLLLVFLLVLTIFVSACSGKQSSDKGTASKDSKQEATI---L     45

BSNT_01914___     47 KTEPFSLHPGL----ANDSVSGGVIRQTFEGLTRIN---------ADGEP     83
                     :::..   |.:    |:|::|...:...||||.|.|         |||||
BPUM_1070         46 ESQEM---PAMDTIQASDTISFTTMNNVFEGLYRFNDKEELVPGMADGEP     92

BSNT_01914___     84 EEGMASKIETSKDGKTYTFTIRDGVKWSNGDPVTAQDFEYAWKWALDPNN    133
                             ..:||...|...::| .||||||||.||||.|||:.||||:.
BPUM_1070         93 --------VANKDKTVYNIKLKD-AKWSNGDPVKAQDFVYAWQRALDPDQ    133

BSNT_01914___    134 ESQYA-YQLY-YIKGAEAANTGKGSLDDVAVKAVNDKTLKVELNNPTPYF    181
                     :|:|. |.:. .||.|:.....|...|::.:|||:||.|::.|..|.|||
BPUM_1070        134 KSEYGPYMMVGKIKNADKVYNKKAKPDELGIKAVSDKELQITLEKPIPYF    183

BSNT_01914___    182 TELTAFYTYMPINKK-IAEKNKKWNTNAGDDYVSNGPFKMTAWKHSGSIT    230
                     ..|.:|.|:.|:|:| :.|:..|:...| .:.|.|||:::::|....:.|
BPUM_1070        184 QSLLSFPTFYPVNEKFVKEQGDKYAKTA-KNLVYNGPYELSSWDGPQATT    232

BSNT_01914___    231 LE--KNDQYWDKDKVKLKKIDMVMINNNNTELKKFQAGELDWAGMPLGQL    278
                     .|  ||::||||..|.:.|:...:..:....:..|:|||.|..       
BPUM_1070        233 WEYKKNEEYWDKKNVSMTKLTFKVSKDPQAAVNAFEAGEADIT-------    275

BSNT_01914___    279 PTESLPTL--KKDGSLH----VEPIAGVYWYKFNTEAKPLDNVNIRKALT    322
                     |..|.|.:  :.:|...    :||.  |:|.|.|...|.|.|.|:|:|:.
BPUM_1070        276 PKLSTPAIISQYEGDKRMKRLLEPT--VFWLKMNQGNKSLKNENVRRAIA    323

BSNT_01914___    323 YSLDRQSIVKNVTQGEQIPAMAAVPPTM------KGFEDNKEGYFKDNDV    366
                     .::|:::.||:|.|...:.|...:|...      |.|.|....|.:.|. 
BPUM_1070        324 TAIDKEAFVKDVLQNGSVAAYYQIPKDFVHDENGKDFRDGMPKYLETNK-    372

BSNT_01914___    367 KTAKEYLDKGLKEMGLSKASDLPKIKLSYNTDDAH-AK-IAQAVQEMWKK    414
                     ..||:..:|||||:|.|      |:.|:|..||:. || |...:::..:|
BPUM_1070        373 DEAKKLFEKGLKELGTS------KVTLNYLGDDSETAKTIGAFIKDQLEK    416

BSNT_01914___    415 NL-GVDVELDNSEWNVYIDKLHSQDYQIGRMGWLGDFNDPINFLELFRDK    463
                     .| |:|:.:.:..:...||:...:||.:...||..|:.|||.|.:|| ..
BPUM_1070        417 TLPGLDINIQSVPFATRIDRDKKEDYDLQMAGWGPDYLDPITFSDLF-IT    465

BSNT_01914___    464 NGGNNDTGWENPEFKKLLNQS--QTETDKTKHAELLKKAEGIFI-DEMPV    510
                     .||||..|:.|.::.:||..:  :......:..:.|::||.:.: |:..:
BPUM_1070        466 GGGNNHMGYSNKKYDQLLKDASGKLAAKPEERWKALQEAEKVLLQDDAGL    515

BSNT_01914___    511 APIYFHTDTWVQDENLKGVIMPGTGEVYFRNAYFK---    545
                     :|||.....::....:||.::...|. .|...:.|   
BPUM_1070        516 SPIYQRATNYLISNKVKGFVIHKVGP-EFSYKWMKIEG    552


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01914 and BPUM_1070

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
