Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01911 and BPUM_1068
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:26
# Commandline: needle
# -asequence pep-align/BSNT_01911___trpS.1.24716.seq
# -bsequence pep-align/BPUM_1068___trpS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01911___trpS-BPUM_1068___trpS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01911___trpS-BPUM_1068___trpS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01911___trpS
# 2: BPUM_1068___trpS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity: 294/345 (85.2%)
# Similarity: 314/345 (91.0%)
# Gaps: 14/345 ( 4.1%)
# Score: 1529.0
#
#
#=======================================
BSNT_01911___ 1 MSLFYYVLRNEVDVFMKQTIFSGIQPSGSVTLGNYIGAMKQFVELQHDYN 50
..|:|||||||||||||||||||||||||:|||||:
BPUM_1068___t 1 --------------MTKKTIFSGIQPSGSVTLGNYIGAMKQFVDLQHDYH 36
BSNT_01911___ 51 SYFCIVDQHAITVPQDRLELRKNIRNLAALYLAVGLDPEKATLFIQSEVP 100
.|||:||||||||.||||.||:|||:||||||||||||||||||||||||
BPUM_1068___t 37 GYFCVVDQHAITVSQDRLALRQNIRSLAALYLAVGLDPEKATLFIQSEVP 86
BSNT_01911___ 101 AHAQAGWMMQCVAYIGELERMTQFKDKSKGNEAVVSGLLTYPPLMAADIL 150
||||||||:|||||||||||||||||||.|.|||||||||||||||.|||
BPUM_1068___t 87 AHAQAGWMLQCVAYIGELERMTQFKDKSAGKEAVVSGLLTYPPLMAGDIL 136
BSNT_01911___ 151 LYGTDLVPVGEDQKQHLELTRNLAERFNKKYNDIFTIPEVKIPKVGARIM 200
|||||||||||||||||||||.||||||:|||||||:|||||||.|||||
BPUM_1068___t 137 LYGTDLVPVGEDQKQHLELTRTLAERFNRKYNDIFTVPEVKIPKEGARIM 186
BSNT_01911___ 201 SLNDPLKKMSKSDPNQKAYITLLDEPKQLEKKIKSAVTDSEGIVKFDKEN 250
||.||.|||||||||||::||||||||||||||||||||||||||:||||
BPUM_1068___t 187 SLADPTKKMSKSDPNQKSFITLLDEPKQLEKKIKSAVTDSEGIVKYDKEN 236
BSNT_01911___ 251 KPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVVNALKPIQ 300
|||::|||||||:|||.:|.|||.|||||||||||||||.|||:||||||
BPUM_1068___t 237 KPGIANLLTIYSVLGNISIAELEQKYEGKGYGEFKGDLANVVVDALKPIQ 286
BSNT_01911___ 301 DRYYELIESEELDRILDEGAERANRTANKMLKKMENAMGLGRKRR 345
|||||||||:|||||||||||:|||.||||||||||||||||||:
BPUM_1068___t 287 DRYYELIESDELDRILDEGAEKANRAANKMLKKMENAMGLGRKRK 331
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