Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01905 and BPUM_1062

See DNA alignment / Visit BSNT_01905 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence pep-align/BSNT_01905___appA.1.24716.seq
#    -bsequence pep-align/BPUM_1062___appA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01905___appA-BPUM_1062___appA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01905___appA-BPUM_1062___appA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01905___appA
# 2: BPUM_1062___appA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 544
# Identity:     376/544 (69.1%)
# Similarity:   454/544 (83.5%)
# Gaps:           2/544 ( 0.4%)
# Score: 2043.0
# 
#
#=======================================

BSNT_01905___      1 MKRRKTALMMLSVLMVLAIFLSAC-SGSKSSNSSAKKSAGKPQQGGDLVV     49
                     |.|.:.:: ::|:|::..:.|:|| ||:|:|..:.|||.|||.||||||:
BPUM_1062___a      1 MNRNRKSI-LISLLLIFTLMLAACSSGNKTSGDNEKKSTGKPVQGGDLVI     49

BSNT_01905___     50 GSIGEPTLFNSLYSTDDASTDIENMLYSFLTKTDEKLNVKLSLAESIKEL     99
                     |||.||||||||||||.||:|||..:||||.:||.|||.:|||||.|||.
BPUM_1062___a     50 GSIAEPTLFNSLYSTDVASSDIEERIYSFLLQTDGKLNPQLSLAEDIKES     99

BSNT_01905___    100 DGGLAYDVKIKKGVKFHDGKELTADDVVFTYSVPLSKDYKGERGSTYEML    149
                     |.|..:||.||||||||||:||||||||||||:|::|||.|||||.:|:|
BPUM_1062___a    100 DDGKQFDVTIKKGVKFHDGEELTADDVVFTYSIPINKDYNGERGSGFEVL    149

BSNT_01905___    150 KSVEKKGDYEVLFKLKYKDGNFYNNALDSTAILPKHILGNVPIADLEENE    199
                     .||:|.|||.:.|||..||..|||..|.|..||||||||:||:.||.|||
BPUM_1062___a    150 DSVKKTGDYSIEFKLNKKDPYFYNVTLGSYGILPKHILGDVPVKDLGENE    199

BSNT_01905___    200 FNRKKPIGSGPFKFKEWKQGQYIKLEANDDYFEGRPYLDTVTYKVIPDAN    249
                     ||||||||||||||.|||:|.|:||||.|||::|||||||||.|.|||.|
BPUM_1062___a    200 FNRKKPIGSGPFKFAEWKEGDYVKLEAFDDYWDGRPYLDTVTIKTIPDQN    249

BSNT_01905___    250 AAVAQLQAGDINFFNVPATDYKTAEKFNNLKIVTDLALSYVYIGWNEKNE    299
                     ||:|||.||||:||.||..:.:||||.:|:||.:||.|:|.|||||:|||
BPUM_1062___a    250 AAIAQLSAGDIDFFAVPGAELQTAEKISNIKIESDLGLNYSYIGWNQKNE    299

BSNT_01905___    300 LFKDKKVRQALTTALDRESIVSQVLDGDGEVAYIPESPLSWNYPKDIDVP    349
                     |||.||||||||.|:||::||.|||||||:||.||||||||||||:..||
BPUM_1062___a    300 LFKSKKVRQALTHAIDRQTIVDQVLDGDGKVANIPESPLSWNYPKNDRVP    349

BSNT_01905___    350 KFEYNEKKAKQMLAEAGWKDTNGDGILDKDGKKFSFTLKTNQGNKVREDI    399
                     .||::::|||:||.|.||:||:|||.||||||||||.:||||||||||||
BPUM_1062___a    350 VFEFDQEKAKKMLKEEGWEDTDGDGYLDKDGKKFSFVIKTNQGNKVREDI    399

BSNT_01905___    400 AVVVQEQLKKIGIEVKTQIVEWSALVEQMNPPNWDFDAMVMRWSLSTFPD    449
                     |||||:|||:||:|.|.||||:|||:||..||.||:||:::.|||:||||
BPUM_1062___a    400 AVVVQQQLKEIGVEAKPQIVEFSALIEQTTPPKWDYDALLLGWSLATFPD    449

BSNT_01905___    450 QYDIFHSSQIKKGLNYVWYKNAEADKLMKDAKSISDRKQYSKEYEQIYQK    499
                     ||.||||||.:||||.:||||.|.|||:.|||::||||:|||.||:||:.
BPUM_1062___a    450 QYSIFHSSQSEKGLNNIWYKNKEVDKLLVDAKNLSDRKEYSKAYEKIYEL    499

BSNT_01905___    500 IAEDQPYTFLYYPNNHMAMPENLEGYKYHPKRDLYNIEKWWLEK    543
                     ||||||||||||.|:|.|||.||:||.||||.:.|.|||||:|:
BPUM_1062___a    500 IAEDQPYTFLYYANSHRAMPSNLQGYSYHPKDEYYKIEKWWIEQ    543


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