Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01900 and BPUM_1059

See DNA alignment / Visit BSNT_01900 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_01900___yjaZ.1.24716.seq
#    -bsequence pep-align/BPUM_1059___yjaZ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01900___yjaZ-BPUM_1059___yjaZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01900___yjaZ-BPUM_1059___yjaZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01900___yjaZ
# 2: BPUM_1059___yjaZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     132/267 (49.4%)
# Similarity:   177/267 (66.3%)
# Gaps:           6/267 ( 2.2%)
# Score: 694.5
# 
#
#=======================================

BSNT_01900___      1 MSVEQTYSWLRKAGSIDDLAHYIIPLFSGAEKKNWKGILGHLQHHGMFKN     50
                     |.:..|...:.::.|..:||...:|.|.|||:|.|..||.|||||||.::
BPUM_1059___y      1 MGLVNTQYLIHQSSSFQELASRFVPYFKGAEEKEWSSILSHLQHHGMIRS     50

BSNT_01900___     51 IKEGIQTVSKLKEKGFYGHIQKEEQYLKNKWQGPDVPIVTLPVDERNRRI    100
                     .|.....:::|||||::..:.||.:.|:.:|:|||:|:..|||:|.:|.|
BPUM_1059___y     51 FKSCKDMINQLKEKGYFQLVMKEYRALQKQWKGPDIPVFILPVNESSREI    100

BSNT_01900___    101 RLEFGSKSGLAFQDKMFLFLSSDLDFGSVSALMTHEYHHVCRLGHLTKEE    150
                     |.:|..:||:||.||:|||||.:.....:..|:||||||||||..|||||
BPUM_1059___y    101 REQFYYQSGMAFDDKVFLFLSPNTPKERIGTLLTHEYHHVCRLHFLTKEE    150

BSNT_01900___    151 KDVTLLDTIIMEGLAEYAVYERFGRSQTAEWTTWYTPEQLQALYEKKIAP    200
                     ||.|.||||:||||||||||.|:|.|.||:|||.|...|||.:|:|.::.
BPUM_1059___y    151 KDFTFLDTIMMEGLAEYAVYHRYGESYTAKWTTLYDESQLQRMYQKWVSS    200

BSNT_01900___    201 HRD--IKRDNRLFPQLLFGKGYQPKMLGYAVGFNIVKKYLTASKASAADG    248
                     |.|  ::.|.||...||:|||..|||||||.||.|||||....:.|....
BPUM_1059___y    201 HLDQKVQDDERLIQNLLYGKGNYPKMLGYATGFYIVKKYFNEHRISEESM    250

BSNT_01900___    249 LSIPAETFLDAML----    261
                     ::.|:||||.|:.    
BPUM_1059___y    251 IAEPSETFLKAIDSQSE    267


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