Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01898 and BPUM_1057

See DNA alignment / Visit BSNT_01898 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_01898___fabHA.1.24716.seq
#    -bsequence pep-align/BPUM_1057___fabHA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01898___fabHA-BPUM_1057___fabHA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01898___fabHA-BPUM_1057___fabHA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01898___fabHA
# 2: BPUM_1057___fabHA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     277/312 (88.8%)
# Similarity:   297/312 (95.2%)
# Gaps:           0/312 ( 0.0%)
# Score: 1427.0
# 
#
#=======================================

BSNT_01898___      1 MKAGILGVGRYIPEKVLTNHDLEKMVETSDEWIRTRTGIEERRIAADDVF     50
                     |.|||:|:|||||||||||.|||||||||||||||||||||||||:|||.
BPUM_1057___f      1 MNAGIIGLGRYIPEKVLTNLDLEKMVETSDEWIRTRTGIEERRIASDDVN     50

BSNT_01898___     51 SSHMAVAAAKNALEQAEVAAEDLDMILVATVTPDQSFPTVSCMIQEQLGA    100
                     :||||:||||.||..|:|||||:||||||||||||:||||:|||||||||
BPUM_1057___f     51 TSHMALAAAKKALADADVAAEDIDMILVATVTPDQAFPTVACMIQEQLGA    100

BSNT_01898___    101 KKACAMDISAACAGFMYGVVTGKQFIESGTYKHVLVVGVEKLSSITDWED    150
                     .|||||||||||||||||:|||||||||||:||||||||||||.||||:|
BPUM_1057___f    101 HKACAMDISAACAGFMYGLVTGKQFIESGTFKHVLVVGVEKLSRITDWDD    150

BSNT_01898___    151 RNTAVLFGDGAGAAVVGPVSDDRGILSFELGADGTGGQHLYLNEKRHTIM    200
                     |||||||||||||||:|.||:.:|||||||||||.||:||||:||.||||
BPUM_1057___f    151 RNTAVLFGDGAGAAVLGEVSEGKGILSFELGADGRGGKHLYLDEKDHTIM    200

BSNT_01898___    201 NGREVFKFAVRQMGESCVNVIEKAGLSKEDVDFLIPHQANIRIMEAARER    250
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BPUM_1057___f    201 NGREVFKFAVRQMGESSVNVIEKAGLSKEDVDFLIPHQANIRIMEAARER    250

BSNT_01898___    251 LELPVEKMSKTVHKYGNTSAASIPISLVEELEAGKIKDGDVVVMVGFGGG    300
                     |||||||||||||||||||||||||||.||:|||||.||||:||||||||
BPUM_1057___f    251 LELPVEKMSKTVHKYGNTSAASIPISLCEEIEAGKIHDGDVIVMVGFGGG    300

BSNT_01898___    301 LTWGAIAIRWGR    312
                     |||||||:||||
BPUM_1057___f    301 LTWGAIAMRWGR    312


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.