Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01889 and BPUM_1051

See DNA alignment / Visit BSNT_01889 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_01889___yjzD.1.24716.seq
#    -bsequence pep-align/BPUM_1051___yjzD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01889___yjzD-BPUM_1051___yjzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01889___yjzD-BPUM_1051___yjzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01889___yjzD
# 2: BPUM_1051___yjzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 64
# Identity:      31/64 (48.4%)
# Similarity:    46/64 (71.9%)
# Gaps:           3/64 ( 4.7%)
# Score: 169.5
# 
#
#=======================================

BSNT_01889___      1 MRYIIAFIWTFLLSHMACYLVASMNSVTYNFKTSSVIAVVLYVLIMVLAE     50
                     |.|||..||||||:|||.|:|||||...|:|..:|::|||..|::.:.||
BPUM_1051___y      1 MHYIITLIWTFLLTHMAGYIVASMNGAAYDFTLTSILAVVFTVILFIFAE     50

BSNT_01889___     51 IMPM--NKNASQH-     61
                     :.||  .:::::| 
BPUM_1051___y     51 VSPMKETESSTKHS     64


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.