Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_01884 and BPUM_1047

See DNA alignment / Visit BSNT_01884 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence pep-align/BSNT_01884___carB.1.24716.seq
#    -bsequence pep-align/BPUM_1047___carB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01884___carB-BPUM_1047___carB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01884___carB-BPUM_1047___carB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01884___carB
# 2: BPUM_1047___carB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1030
# Identity:     763/1030 (74.1%)
# Similarity:   883/1030 (85.7%)
# Gaps:           4/1030 ( 0.4%)
# Score: 3928.0
# 
#
#=======================================

BSNT_01884___      1 MPKDTSISSILVIGSGPIIIGQAAEFDYSGTQGCIALKEEGYRVILVNSN     50
                     ||||.||.:|||||||||||||||||||||||||:|||||||:|||||:|
BPUM_1047___c      1 MPKDQSIQTILVIGSGPIIIGQAAEFDYSGTQGCMALKEEGYKVILVNNN     50

BSNT_01884___     51 PATIMTDEAFADEIYFEPLTAESLTAIIKKEQPDGLLANLGGQTALNLAV    100
                     ||||||||:||||||||||:.:|:|.||:||:||||||||||||||||||
BPUM_1047___c     51 PATIMTDESFADEIYFEPLSVDSVTRIIEKEKPDGLLANLGGQTALNLAV    100

BSNT_01884___    101 ELEETGVLKEHGVKLLGTSVETIQKGEDREKFRSLMNELNQPVPESEIVD    150
                     |||:.||||:|||.|||||||||:.||||||||:||.:||:|||:|||||
BPUM_1047___c    101 ELEKAGVLKKHGVTLLGTSVETIENGEDREKFRALMKQLNEPVPDSEIVD    150

BSNT_01884___    151 NETDAIRFAESIGFPVIIRPAYTLGGKGGGIAPDKEAFTAMIKQALLASP    200
                     |..||::||:.:|||||:||||||||||||||..:|||..:|:.||||||
BPUM_1047___c    151 NAQDALQFAKEVGFPVILRPAYTLGGKGGGIALTEEAFKPLIEGALLASP    200

BSNT_01884___    201 INQCLVEKSIAGFKEIEYEVMRDSNNTCITVCNMENIDPVGVHTGDSIVV    250
                     |:|||||||||||||:|||||||..|||||||||||||||||||||||||
BPUM_1047___c    201 IHQCLVEKSIAGFKEVEYEVMRDRQNTCITVCNMENIDPVGVHTGDSIVV    250

BSNT_01884___    251 APSQTLTDEDYQMLRTASLTIISALDVVGGCNIQFALDPFSKQYYVIEVN    300
                     ||||||||:||||||:|||.|||||||||||||||||||.||:|:|||||
BPUM_1047___c    251 APSQTLTDQDYQMLRSASLKIISALDVVGGCNIQFALDPLSKEYFVIEVN    300

BSNT_01884___    301 PRVSRSSALASKATGYPIAKMAAKLAVGYTLDELKNPLTGSTYASFEPAL    350
                     ||||||||||||||||||||||||||||||||||||||||:|||||||||
BPUM_1047___c    301 PRVSRSSALASKATGYPIAKMAAKLAVGYTLDELKNPLTGTTYASFEPAL    350

BSNT_01884___    351 DYVIVKFPRWPFDKFKNADRKLGTKMKATGEVMAIERNLEAAIQKAAASL    400
                     |||:||||||||||||.|||:||||||||||||||:||||:|||||.|||
BPUM_1047___c    351 DYVVVKFPRWPFDKFKQADRQLGTKMKATGEVMAIDRNLESAIQKAVASL    400

BSNT_01884___    401 ELKNIGTHLPELSGLSIDTLWDLAITPDDRRFFVVMELLSRSVSIDDIHE    450
                     |:|..|.|||||...|.:.|::|..||||||||.|||||||..:::.||:
BPUM_1047___c    401 EIKTKGFHLPELKDQSTEQLFELVKTPDDRRFFAVMELLSRQETVEAIHQ    450

BSNT_01884___    451 KTKIDPFFLHTFDNIIKLENRLMEAGSDLSFELLKKAKEKGFSDATIASL    500
                     .||||.||||.|:|:|.|...|......||.:.|||.|||||.|.|||.|
BPUM_1047___c    451 ATKIDRFFLHVFNNMITLVQELKNHEGTLSKDTLKKVKEKGFLDETIALL    500

BSNT_01884___    501 IGKTEEEVRALRKEMGITPSFKIVDTCAAEFDAKTNYFYSTYFGETDGDI    550
                     .|.:||.:|.||:|.|||.|||||||||||||||||||||||||::||:.
BPUM_1047___c    501 TGNSEEAIRQLRQEYGITASFKIVDTCAAEFDAKTNYFYSTYFGKSDGEH    550

BSNT_01884___    551 SRKEKKRALIIGSGPIRIGQGVEFDNSAVHGVLTLQELGFETIMINNNPE    600
                     ..|.|:|||||||||||||||||||.||||||||||:|||||||:|||||
BPUM_1047___c    551 QEKTKQRALIIGSGPIRIGQGVEFDYSAVHGVLTLQKLGFETIMMNNNPE    600

BSNT_01884___    601 TVSTDYEIADRLYFEPMTTEHIVNVAEQENIDFAIVQFGGQTAINAAEAL    650
                     ||||||||||||||||:|.|||:||.|.|.|||.|||||||||||.||.|
BPUM_1047___c    601 TVSTDYEIADRLYFEPITLEHILNVVEAEQIDFVIVQFGGQTAINVAEGL    650

BSNT_01884___    651 EKAGITLLGTSFQTLDVLEDRDQFYQLLDELGLKHAKGEIAYTKEEAASK    700
                     ||||||||||||.|||.|||||.||||||||.|.||||:.|::||||.:.
BPUM_1047___c    651 EKAGITLLGTSFDTLDALEDRDLFYQLLDELNLPHAKGDTAHSKEEALTH    700

BSNT_01884___    701 ASEIGYPVLIRPSYVIGGMGMIIVDSQAQLSQLLNDEDSMPYPILIDQYV    750
                     |..||||||||||||||||||::|.|:|.|:.||:..|.:|||||||:||
BPUM_1047___c    701 AKSIGYPVLIRPSYVIGGMGMMVVQSEAHLTALLDQPDHLPYPILIDEYV    750

BSNT_01884___    751 SGKEVEIDLISDGEDVFIPTYTEHIERAGVHSGDSFAILPGPSITSGLQQ    800
                     :|||||:||||||:..||||..||||:|||||||||||||..||:..::|
BPUM_1047___c    751 TGKEVEVDLISDGKTTFIPTIVEHIEKAGVHSGDSFAILPSVSISEDIKQ    800

BSNT_01884___    801 GMKDAAQKIARKLSFKGIMNIQFVIDNGNILVLEVNPRASRTVPVVSKVM    850
                     .:..|:::||:||:|||||||||||.....||||||||||||||||||||
BPUM_1047___c    801 QVHIASEQIAKKLAFKGIMNIQFVIKGDQALVLEVNPRASRTVPVVSKVM    850

BSNT_01884___    851 GVPMIPLATRLLAGASLKDLDPAVQNHHGVAVKFPVFSSHAIQDVDIKLG    900
                     |:.||||||:|||||:|.:|:|..:|..|.||||||||||||||:|:||.
BPUM_1047___c    851 GIDMIPLATQLLAGATLDELNPVTKNKGGTAVKFPVFSSHAIQDIDLKLT    900

BSNT_01884___    901 PEMKSTGEGMCVAYDSNSALKKIYTRVWSQKGSIYLQNVPEDVQELAENA    950
                     ||||:|||||||..::.|||||::..:|.|||||:::...:.|.| |::|
BPUM_1047___c    901 PEMKATGEGMCVGKNAESALKKVFASIWHQKGSIFIKGNEQLVDE-AKHA    949

BSNT_01884___    951 GFTVHEGTFASWMEQEEKSLHINLSGSEEARIERLEAMTHGIPVFTEEET   1000
                     ||.|...:|.:|::.|:|:|||:|...|||:.:|::|:|||:.|.||.||
BPUM_1047___c    950 GFDVWTDSFDTWLQNEDKTLHIHLGEDEEAKEQRVKALTHGVQVLTEYET    999

BSNT_01884___   1001 VRAFLQSGSGHPQPVSLKDLYKKEVASCTQ   1030
                     |:||||..:|...||||::||||||.:   
BPUM_1047___c   1000 VQAFLQGKNGDVSPVSLQELYKKEVTA---   1026


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01884 and BPUM_1047

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
