Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01866 and BPUM_1033

See DNA alignment / Visit BSNT_01866 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence pep-align/BSNT_01866___yitT.1.24716.seq
#    -bsequence pep-align/BPUM_1033___yitT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01866___yitT-BPUM_1033___yitT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01866___yitT-BPUM_1033___yitT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01866___yitT
# 2: BPUM_1033___yitT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     249/280 (88.9%)
# Similarity:   270/280 (96.4%)
# Gaps:           0/280 ( 0.0%)
# Score: 1288.0
# 
#
#=======================================

BSNT_01866___      1 MVLDQTKKLLIVIIGALLNAAGLNLFLIPADVYASGFTGVAQLLSSVVDQ     50
                     |.:.:.|||::|:|||||||.|||||||||||||||||||||||||::||
BPUM_1033___y      1 MFIGEAKKLIVVVIGALLNAIGLNLFLIPADVYASGFTGVAQLLSSLMDQ     50

BSNT_01866___     51 YAPFYISTGTLLFLLNIPVGILGWLKVGKSFTVYSILSVALTTLFMGILP    100
                     |||||||||.|||:||||||||||:|||:|||:|||:||||||:|:||||
BPUM_1033___y     51 YAPFYISTGILLFILNIPVGILGWMKVGRSFTLYSIISVALTTIFLGILP    100

BSNT_01866___    101 ETSLSHDILLNAVFGGVISAVGIGLTLKYGASTGGLDIVAMVLAKWKDKP    150
                     |||:||||||||||||||||||||:|||||||||||||||||||||||||
BPUM_1033___y    101 ETSVSHDILLNAVFGGVISAVGIGITLKYGASTGGLDIVAMVLAKWKDKP    150

BSNT_01866___    151 VGTYFFILNGIIILTAGLLQGWEKALYTLVTLYVTTRVIDAIHTRHMKLT    200
                     |||||||||||||.||||||||||||||||||||||||||||||||.|||
BPUM_1033___y    151 VGTYFFILNGIIIFTAGLLQGWEKALYTLVTLYVTTRVIDAIHTRHEKLT    200

BSNT_01866___    201 AMIVTKKADEIKEAIYGKMVRGITTVPAKGAFTNEQKEMMIIVITRYELY    250
                     |||||||||||||||||||||||||||||||||||.||||:|||||||||
BPUM_1033___y    201 AMIVTKKADEIKEAIYGKMVRGITTVPAKGAFTNEPKEMMVIVITRYELY    250

BSNT_01866___    251 DLEKIVKEVDPKAFTNIVQTTGIFGFFRKD    280
                     :||:|:|||||||||||||||.|.||||:|
BPUM_1033___y    251 ELEQIIKEVDPKAFTNIVQTTNILGFFRRD    280


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