Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01843 and BPUM_1013
See
DNA alignment /
Visit
BSNT_01843 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:21
# Commandline: needle
# -asequence pep-align/BSNT_01843___yisQ.1.24716.seq
# -bsequence pep-align/BPUM_1013___yisQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01843___yisQ-BPUM_1013___yisQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01843___yisQ-BPUM_1013___yisQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01843___yisQ
# 2: BPUM_1013___yisQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 464
# Identity: 319/464 (68.8%)
# Similarity: 382/464 (82.3%)
# Gaps: 15/464 ( 3.2%)
# Score: 1657.0
#
#
#=======================================
BSNT_01843___ 1 -------MKQAVFKSTALKKPADKTFSLFSLTWPIFIEVSLYMFMGNADT 43
::|...|.. |.|. |||:||||||||:||||.||:|||
BPUM_1013___y 1 MKPQSLPIQQTQAKGK--KNPP----SLFALTWPIFIEISLYMLMGSADT 44
BSNT_01843___ 44 LMLSQYSDNSVAAVGVSNQILNLIIVMFSFIATGTTVIISQFLGSRQKKE 93
|||||||||||||||||||:|||:|||||||.||||::|:|.||:.:::|
BPUM_1013___y 45 LMLSQYSDNSVAAVGVSNQLLNLLIVMFSFITTGTTIVIAQLLGASRRQE 94
BSNT_01843___ 94 AMEVAYVSIGANFFISLAISAIVFFAAVPLLHMMGLSDALMPDAKVFLQV 143
|.:|||||:|.||.||..||.::|..|||:||:||||..|||||.||||:
BPUM_1013___y 95 AAQVAYVSLGTNFLISFVISLLMFVLAVPILHLMGLSSELMPDATVFLQI 144
BSNT_01843___ 144 VGGLSFIQALIMTFSAILKSYGYTKDTMFVTIGMNILNIAGNFVVIFGLF 193
||.||||||||||:||||||||||:|||:||||||:||:|||::||||.|
BPUM_1013___y 145 VGLLSFIQALIMTYSAILKSYGYTRDTMYVTIGMNLLNVAGNYLVIFGPF 194
BSNT_01843___ 194 GFPVLGVAGVAMSTSIARVIGLIAMIVIVNKRIQLKMSLKKVFHMHKEHL 243
|||:|||.|||.|||:||:|||:|||:||.:||.|:.||||:||:.:.:|
BPUM_1013___y 195 GFPILGVMGVAFSTSLARLIGLMAMILIVRRRIGLRFSLKKMFHIQRTYL 244
BSNT_01843___ 244 RKLLKIGIPSAGEQLSYNLSQMIVTYFIAIMGAQALTTKVYTQNITMFIL 293
:|||||||||||||||||.||||:|.||.:||.|||..|||||||.|||:
BPUM_1013___y 245 KKLLKIGIPSAGEQLSYNGSQMIITLFITLMGTQALAAKVYTQNIMMFIM 294
BSNT_01843___ 294 LFGTAISQGTQILIGRYIGGKQFDAAYERCMKSLYWALGIAAATSVLMTI 343
|||.||||||||||||:||.|:|||||.|||||||||:||:..:|..:::
BPUM_1013___y 295 LFGAAISQGTQILIGRHIGAKEFDAAYHRCMKSLYWAIGISLLSSTALSL 344
BSNT_01843___ 344 FSKDLIGLFTQSPDIIATASLLIAMTIILEPGRSFNVIIINSLRAAGDAK 393
.|..|:..||.:.:||.||:.|:.:|||||||||||::||||||||||||
BPUM_1013___y 345 SSTHLLAFFTSNSEIIQTAATLLLLTIILEPGRSFNMVIINSLRAAGDAK 394
BSNT_01843___ 394 FPVYMAMISMWGIGLPLAYLFGIHLGFGLAGIWISFIADEWVRGILMYRR 443
||||||||||||||||:|||.||....||.|||||||.|||||||.||||
BPUM_1013___y 395 FPVYMAMISMWGIGLPIAYLLGIQFEMGLIGIWISFIVDEWVRGIFMYRR 444
BSNT_01843___ 444 WRSRIWIQKGMA-- 455
||||:|.:...:
BPUM_1013___y 445 WRSRVWTEYRFSST 458
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.