Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01826 and BPUM_1003

See DNA alignment / Visit BSNT_01826 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_01826___gerPA.1.24716.seq
#    -bsequence pep-align/BPUM_1003___gerPA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01826___gerPA-BPUM_1003___gerPA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01826___gerPA-BPUM_1003___gerPA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01826___gerPA
# 2: BPUM_1003___gerPA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 73
# Identity:      53/73 (72.6%)
# Similarity:    65/73 (89.0%)
# Gaps:           0/73 ( 0.0%)
# Score: 308.0
# 
#
#=======================================

BSNT_01826___      1 MPAIVGAFKINAIGTSGVVHIGDCITISPQAQVRTFAGAGSFNTGDSLKV     50
                     |||||||||:||:|||||||:||||||||.:||:||||||||||||.|::
BPUM_1003___g      1 MPAIVGAFKVNAVGTSGVVHVGDCITISPNSQVKTFAGAGSFNTGDQLRI     50

BSNT_01826___     51 MNYQNTTNVYDNDAVDQPIVANA     73
                     .||::.||.||:|.:|||:|.|.
BPUM_1003___g     51 SNYKSVTNTYDSDVIDQPLVGNL     73


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