Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01815 and BPUM_0996
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence pep-align/BSNT_01815___yirY.1.24716.seq
# -bsequence pep-align/BPUM_0996___sbcC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01815___yirY-BPUM_0996___sbcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01815___yirY-BPUM_0996___sbcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01815___yirY
# 2: BPUM_0996___sbcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1144
# Identity: 591/1144 (51.7%)
# Similarity: 778/1144 (68.0%)
# Gaps: 27/1144 ( 2.4%)
# Score: 2758.5
#
#
#=======================================
BSNT_01815___ 1 MKPIALSIKGLHSFREEQTIDFEGLSGAGVFGIFGPTGSGKSSILDAMTL 50
||||.|:|||||||||||||||..|..|||||||||||||||||||||||
BPUM_0996___s 1 MKPITLTIKGLHSFREEQTIDFSSLCDAGVFGIFGPTGSGKSSILDAMTL 50
BSNT_01815___ 51 ALYGKVERAANNTHGILNQAEDTLSVSFTFALQTNHQISYKVERVFKRTD 100
|||||||||.|||||||||||:.||||||||||..|.|||||||.|||.|
BPUM_0996___s 51 ALYGKVERALNNTHGILNQAEEKLSVSFTFALQKEHHISYKVERAFKRAD 100
BSNT_01815___ 101 EMKVKTALCRFIEIKDEHTVLADKASEVNKRVEELLGLTIDDFTRAVVLP 150
||||:|.|||.|||.|..|||||||||||::|||||||||||||||||||
BPUM_0996___s 101 EMKVRTTLCRLIEIGDTQTVLADKASEVNRKVEELLGLTIDDFTRAVVLP 150
BSNT_01815___ 151 QGKFAEFLSLKGAERRHMLQRLFNLEQYGDRLVKKLRRQAQEANARKNEM 200
|||||||||||||:||.|||||||||:|||:|||:||.:||:...:|||:
BPUM_0996___s 151 QGKFAEFLSLKGADRRQMLQRLFNLEKYGDQLVKRLRAKAQKHYGQKNEL 200
BSNT_01815___ 201 LAEQSGLGEASSEAVEQAEKALEQAEARLEAMRKNRDQAKERFTEHQEIW 250
|||.:|||||..||:.:|::|.|||:|.....::.||:|...||:.|.||
BPUM_0996___s 201 LAELNGLGEAGPEALAKAKEAAEQAKAIFHEKKQARDEAFTAFTKAQAIW 250
BSNT_01815___ 251 NVQKEKSAYEEEEKRLAEEQSHIDSMQKRLLEAETAAALKPYADRYAEAI 300
..|||:.|||.|:.:|......|:..:|:|..||.|..||||||...:|.
BPUM_0996___s 251 QYQKEQEAYETEQNKLNLLAPSIEEKKKKLHIAEQAETLKPYADALTKAE 300
BSNT_01815___ 301 QHEEQAEKEQTLAQKDLADRTAFFQQKHEEYEAWRQHKSEKEPELLTEQE 350
:...||.:|:..|:|.|..:...:.|...|||..||.|.|.||:||.::|
BPUM_0996___s 301 KQLSQASQEKQEAEKQLLHQRTIYDQMAREYEQARQKKIETEPDLLKKKE 350
BSNT_01815___ 351 QLSRLQEIEIKLSEAKQEEERKKADLRQKEEALQSVM---NELETVTDRL 397
||.:|:|||.|...|..| |....|||.|..|.:: .|.|.:...|
BPUM_0996___s 351 QLIQLKEIERKKEAALHE---KTGIERQKNEKAQQLLQKKEEAENLQSLL 397
BSNT_01815___ 398 TRGQNRQTELKQQLKSLQVTSNERKSCHQAAEMALRIRQTEEQIKKEKKR 447
.|...:||:|..:|:.|||:..||||...|..::..:.:....::|||::
BPUM_0996___s 398 ERALTKQTQLNHELEQLQVSVKERKSVQDALRLSENVERINLSVQKEKQK 447
BSNT_01815___ 448 SEELNLVLQKMNEEKNTLVQKTEAEENNIIQAYEAVQTVYHLVCETERSL 497
.:|||....:.:|....|.::.......|.|:::|::.:|..|||.||:|
BPUM_0996___s 448 LDELNKRALQTSEAYEKLQKQQNDHHEKIDQSFQAIEHLYFYVCELERAL 497
BSNT_01815___ 498 TRMTEETRKSQHTLHLQREKARVALLTKELAQKLTAGKPCPVCGSTDHDP 547
|...::.:..:.....||:..|.|.|.||||.:|..|:|||||||..|||
BPUM_0996___s 498 TEWNQKVQHQKLEKLKQRDAVRAAELRKELAAELVDGEPCPVCGSIHHDP 547
BSNT_01815___ 548 SASVHETYEADSH------LEEDIKRTDVLLTEAAALSQEILSAKITLEE 591
.| .|:::| ::|.|:|.|..|.:|.|..:.|.:||..||.
BPUM_0996___s 548 KA-----LESNNHDETVAQVDEIIQRMDQELKQAEAYGRGIYAAKQLLET 592
BSNT_01815___ 592 QSARFIEQCPFLQTIQAQNLEAAASFENQPVYEAFETVKFEWKRIKQDIL 641
.:.:.::|..||.. :|...|.||:.|......:.:.:..|||.:||||.
BPUM_0996___s 593 HANQLVKQFSFLSQ-KAPGAEVAAAVETVQNSHSLQGLMQEWKGVKQDIQ 641
BSNT_01815___ 642 SVKTRMAQMIGAYQESLKKAEQLNEKIGFEKREADRIESIISELQSSMDS 691
.|:.:.|:::........:..::.|::.||::....:|.:|.||.:.:..
BPUM_0996___s 642 EVEQKRARLMDETHNQATEMSKIKEQMTFEQQRIKELEVLIKELHAELSE 691
BSNT_01815___ 692 SLNMFKEAFQNQSVDEAEKWQQAIEEKDRAAEECEKRIEKSIAFLAEHEA 741
....|::.|.:.::::.:..|:.|:|||:.||..::||||||:||.|.:.
BPUM_0996___s 692 QTTQFEQTFPHLTLNQVQDMQKQIDEKDQQAEGYKERIEKSISFLEEKQL 741
BSNT_01815___ 742 QKEKLRESGHRLEREKLELHYAAERIKSVIADYEHELGDY-AKGDSIQIK 790
.||:|:.:.:.:|:|..:|.:..|..:.:|..||.:||.| .|..||..:
BPUM_0996___s 742 AKEQLQTAIYNVEKELDKLAHQLESQQQLIQQYETDLGRYPLKAASISDE 791
BSNT_01815___ 791 LRSVQQDLKLLKEKEQSLYEELQSAQMKLNQAKSRASASELTLQEAKGRL 840
|..|:..|.||.||||..|::||.||...::|:|..|:||..||||..|.
BPUM_0996___s 792 LIEVEHTLSLLNEKEQQSYKQLQHAQQLFSEAQSHFSSSERQLQEANRRK 841
BSNT_01815___ 841 EKAKAAWLEHTKNTSITRTEEVEQSLIPADELEKMKTGIDQFMDKLKQNA 890
::|:.:|.:..:::.....:::|...:...|.:.:|..|::|.||.|:.|
BPUM_0996___s 842 QEAETSWEKEAESSPFHIPQDIESVSMEQVERQSVKQEIEEFEDKRKECA 891
BSNT_01815___ 891 ANLKRVAEILAGRALSESEWNETVAALQEAEDAFGAAIEE----KGAAAK 936
|||||::|:|...:|.|::|.: :|..:||...|:|| .|:|.:
BPUM_0996___s 892 ANLKRISELLKEESLDENQWTD----IQHRKDAAEKALEEATAMNGSAHE 937
BSNT_01815___ 937 ALAVIRDHHKRFNEIEAELKKWQTHIDRLDKLQAVFKGNTFVEFLAEEQL 986
.|.||.::|:||..|...|:..|..||||||||.||||||||||||||||
BPUM_0996___s 938 HLRVIEENHQRFASIHERLEALQQEIDRLDKLQTVFKGNTFVEFLAEEQL 987
BSNT_01815___ 987 ESVARDASARLSMLTRQRYAIEVDSEGGFVMRDDANGGVRRPVSSLSGGE 1036
|||:||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0996___s 988 ESVSRDASARLSMLTRQRYAIEVDSEGGFVMRDDANGGVRRPVSSLSGGE 1037
BSNT_01815___ 1037 TFLTSLSLALALSAQIQLRGEYPLQFFFLDEGFGTLDQDLLDTVVTALEK 1086
||||||:||||||||||||||:||||||||||||||||||||||:|||||
BPUM_0996___s 1038 TFLTSLALALALSAQIQLRGEFPLQFFFLDEGFGTLDQDLLDTVITALEK 1087
BSNT_01815___ 1087 LQSDNLAVGVISHVQELRARLPKKLIVHPAEPSGRGTRVSLELM 1130
|||.||||||||||:||:.|||||||||||:|||:||.||:|||
BPUM_0996___s 1088 LQSHNLAVGVISHVEELKMRLPKKLIVHPADPSGKGTTVSMELM 1131
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