Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01776 and BPUM_0989

See DNA alignment / Visit BSNT_01776 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence pep-align/BSNT_01776___yhjD.1.24716.seq
#    -bsequence pep-align/BPUM_0989.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01776___yhjD-BPUM_0989.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01776___yhjD-BPUM_0989.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01776___yhjD
# 2: BPUM_0989
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:      58/127 (45.7%)
# Similarity:    82/127 (64.6%)
# Gaps:           9/127 ( 7.1%)
# Score: 296.0
# 
#
#=======================================

BSNT_01776___      1 --MPNLQEEIYDLIERALFLPMAITIFNRDLAGIEE-STLKLKHPYKQLI     47
                       |..|......::|:|:||||.::|.||||..::: .|.||..||.||:
BPUM_0989          1 MDMTRLSRIQLQMMEQAIFLPMVVSILNRDLTHLKQHQTFKLNEPYIQLV     50

BSNT_01776___     48 SESLKIAQKDLMEVRKELRKRKIAIRETERDEAFTLYTFVIDGYEENHRY     97
                     :..||.|||.|.|:::.|||.|:.:::.|.||.||.|.|::|||||.|:|
BPUM_0989         51 TSVLKEAQKALYELKQHLRKEKMKVQQIEHDEGFTTYLFIMDGYEEKHKY    100

BSNT_01776___     98 FNPRIREQVSELLT-YYLFAPDRLRAF    123
                     ||||||.:|.|||| |:|...:     
BPUM_0989        101 FNPRIRHRVEELLTRYFLHQAN-----    122


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