Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00677 and BPUM_0987

See DNA alignment / Visit BSNT_00677 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:27
# Commandline: needle
#    -asequence pep-align/BSNT_00677___yclQ.1.24716.seq
#    -bsequence pep-align/BPUM_0987___yclQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00677___yclQ-BPUM_0987___yclQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00677___yclQ-BPUM_0987___yclQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00677___yclQ
# 2: BPUM_0987___yclQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity:     206/319 (64.6%)
# Similarity:   258/319 (80.9%)
# Gaps:           7/319 ( 2.2%)
# Score: 1082.5
# 
#
#=======================================

BSNT_00677___      1 MKKFALLFIALVTAVVISACGNQSTSSKGSDSKEEQITVKHQLDKNGTKV     50
                     |||:..:...|...||::|||||   .|...:|||.:|||..|:|:|.|:
BPUM_0987___y      1 MKKWIWMMTVLTAIVVLAACGNQ---GKTEGTKEETVTVKDMLNKDGVKI     47

BSNT_00677___     51 PKSPKKVVVFDFGSLDTLDKLGLDDKVAGLPKQALPKYLSKFKDDKYADV    100
                     .|:||||||||.||||||||||::  |..||||.:||||||::.|||.:|
BPUM_0987___y     48 KKNPKKVVVFDMGSLDTLDKLGVN--VTALPKQVVPKYLSKYEGDKYKNV     95

BSNT_00677___    101 GSLKEPDFEKVADLDPDLIIISGRQSESYKEFSEIAPTIYLGVDTAKYME    150
                     |.||||:|||:|::|||||||..||::::.||||||||||:.||.|.|||
BPUM_0987___y     96 GGLKEPNFEKIAEIDPDLIIIQHRQADAFDEFSEIAPTIYMDVDNANYME    145

BSNT_00677___    151 SFKSDAETIGKIFDKEDEVKDELAKIDHSIADVKKTAEKLNKNGLVIMAN    200
                     |||.:|.|:||||||||:||:|||.||..:..:||.|:::.|||||||||
BPUM_0987___y    146 SFKKNATTLGKIFDKEDKVKEELAAIDQKVDALKKQAKEIKKNGLVIMAN    195

BSNT_00677___    201 DGKISAFGPKSRYGLIHDVFGVTPADKNIKAS-THGQSVSYEYISKTNPD    249
                     |.|::||||||||||||||||:||||:.::.| .||||:||||:.|||||
BPUM_0987___y    196 DSKMTAFGPKSRYGLIHDVFGITPADQKLEPSDKHGQSISYEYMVKTNPD    245

BSNT_00677___    250 YLFVIDRGTAIGETSSTKQVVENDYVKNVNAVKNDHVVYLDSATWYLSGG    299
                     ||||:|||.||||.:|.||:|||||||:|.||||:|||||:|..||||||
BPUM_0987___y    246 YLFVVDRGAAIGEETSAKQLVENDYVKSVKAVKNNHVVYLNSDMWYLSGG    295

BSNT_00677___    300 GLESMAQMIKEVKDGLEK-    317
                     ||||:..||.|||.|::: 
BPUM_0987___y    296 GLESLTAMIDEVKQGIDQK    314


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