Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01694 and BPUM_0936

See DNA alignment / Visit BSNT_01694 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:12
# Commandline: needle
#    -asequence pep-align/BSNT_01694___yhaM.1.24716.seq
#    -bsequence pep-align/BPUM_0936___yhaM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01694___yhaM-BPUM_0936___yhaM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01694___yhaM-BPUM_0936___yhaM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01694___yhaM
# 2: BPUM_0936___yhaM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     257/314 (81.8%)
# Similarity:   281/314 (89.5%)
# Gaps:          18/314 ( 5.7%)
# Score: 1374.0
# 
#
#=======================================

BSNT_01694___      1 ------------------MIKSSTKGIASNGKPFLTLMLQDQSGDIEAKL     32
                                       :||||||||||||||||||:||||||||||||
BPUM_0936___y      1 MAKGIMTYDVGEQVDLHLLIKSSTKGIASNGKPFLTLILQDQSGDIEAKL     50

BSNT_01694___     33 WDAKQSDEVTYAPQTIVKVVGDVHHYRGRTQLKLRNIRPVSEQENVNIDD     82
                     |||||:||.|||.|||||||||:||||||.||||||||||:|.|.:.|||
BPUM_0936___y     51 WDAKQNDEQTYAAQTIVKVVGDIHHYRGRNQLKLRNIRPVAENEQIRIDD    100

BSNT_01694___     83 FLETAPIPKNEMMDTITQYIFEMKNPNIQRITRFLVKKHEAEFMDYPAAT    132
                     |||||||||::|||||.||||:||||||||:||.|:||:..||.||||||
BPUM_0936___y    101 FLETAPIPKHDMMDTIMQYIFDMKNPNIQRVTRHLLKKYGQEFADYPAAT    150

BSNT_01694___    133 KNHHEFVSGLAYHVVSMLNLAKAIADLYPSLDRDLLYAGVILHDLGKVKE    182
                     ||||||||||||||||||:|||:|.||||||||||||:|:||||||||||
BPUM_0936___y    151 KNHHEFVSGLAYHVVSMLHLAKSIVDLYPSLDRDLLYSGIILHDLGKVKE    200

BSNT_01694___    183 LSGPVSTSYTVEGNLLGHISIMVTELSKAAEELQIDSEEVLILQHLILSH    232
                     |||||||:|||||||:|||||||||::||||||.|||||:||||||:|||
BPUM_0936___y    201 LSGPVSTTYTVEGNLIGHISIMVTEIAKAAEELGIDSEEILILQHLVLSH    250

BSNT_01694___    233 HGKAEWGSPKPPMVKEAEILHYIDNLDAKMNMMDRALERVKPGEYTERVF    282
                     |||.||||||||||||||||||||||||||||||||||.|||||||||:|
BPUM_0936___y    251 HGKGEWGSPKPPMVKEAEILHYIDNLDAKMNMMDRALEHVKPGEYTERIF    300

BSNT_01694___    283 ALENRSFYKPTFHK    296
                     |||||||||||||:
BPUM_0936___y    301 ALENRSFYKPTFHE    314


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