Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05945 and BPUM_0923

See DNA alignment / Visit BSNT_05945 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:30
# Commandline: needle
#    -asequence pep-align/BSNT_05945___yxkF.1.24716.seq
#    -bsequence pep-align/BPUM_0923.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05945___yxkF-BPUM_0923.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05945___yxkF-BPUM_0923.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05945___yxkF
# 2: BPUM_0923
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity:      88/317 (27.8%)
# Similarity:   154/317 (48.6%)
# Gaps:          46/317 (14.5%)
# Score: 289.5
# 
#
#=======================================

BSNT_05945___      1 -MKSLLAIYPGSIVSEELCIREGCLCFFDESNQRYISIPKTEISEKEVLV     49
                      ::.|..:|...|:|..  ..:..:.::.........:.|::::.:|:::
BPUM_0923          1 MLEKLKHVYGEHIISSP--TNDHQILWYQTDEGELFGVDKSKLTAREIIL     48

BSNT_05945___     50 LQSFLTPADEGNQLSMKSPEENKWFSFLFSRGELPAYIKKRTRFVHFHLF     99
                     |.:||||.|..:  :.::.:|.||:|:||....|.  ::...|..:|.:.
BPUM_0923         49 LNTFLTPIDLSH--TKQTEDEQKWYSYLFDNTSLT--VQHPVRVYYFKMS     94

BSNT_05945___    100 GKIE-RTSFTEAV------RHFWPVSFVIVWIHEDRGVIVEQESEAAAKK    142
                     .:.| |....|||      .||       :|...|..:::  ::.|.::.
BPUM_0923         95 HQAEQRQQIKEAVVHSLEHTHF-------IWTGADTAMLI--QTNATSEN    135

BSNT_05945___    143 GELE---SLAKVLESDFYFSVRFYAGRFYEPDECLRKHYTREQAYFLFAE    189
                     .:||   .|:..:.|||.....|..|:.:.|:|.|:|....||...|...
BPUM_0923        136 SQLELLYDLSLAITSDFLTDSVFLQGQLHLPNEHLQKKLLNEQQLVLDHM    185

BSNT_05945___    190 KRLPQVQS--VTFEMIFPFLLLETEKEKLETLLS-------EEAELLFGS    230
                     :| .:|:|  .||....|.||...     |.:||       :||.|    
BPUM_0923        186 QR-GKVRSGISTFYQCLPSLLRYD-----EPILSHAISDAFKEAIL----    225

BSNT_05945___    231 EAELRKTIKLFIENNSNVTLTAKKLHLHRNSLQYRIDKFIERSGIDIKSY    280
                     :.::.:|:..:::.|.|.:..||.|::|||||||||||||||:.|||:.:
BPUM_0923        226 DRDVYRTLMTYMQCNLNASKAAKALYVHRNSLQYRIDKFIERTAIDIRHF    275

BSNT_05945___    281 KGALLAYFICLQNESSE    297
                     ..|...||:....:.| 
BPUM_0923        276 PEASAVYFMMNLLDVS-    291


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