Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01662 and BPUM_0917
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence pep-align/BSNT_01662___nhaX.1.24716.seq
# -bsequence pep-align/BPUM_0917___nhaX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01662___nhaX-BPUM_0917___nhaX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01662___nhaX-BPUM_0917___nhaX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01662___nhaX
# 2: BPUM_0917___nhaX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity: 100/174 (57.5%)
# Similarity: 133/174 (76.4%)
# Gaps: 5/174 ( 2.9%)
# Score: 507.5
#
#
#=======================================
BSNT_01662___ 1 ---MRRMFHADRIIVAFDGSENSKKALQTAIDLAKTVNAAITVAHSHDMK 47
||.:|.|||::|||||.|:|||||:.||.||||::|.:|:|::||.|
BPUM_0917___n 1 MKGMRTLFQADRMVVAFDGHEDSKKALKKAIALAKTLHAKLTIAYAHDGK 50
BSNT_01662___ 48 DNQTVIDPPRPAAEASYISGGMTSVPDP--LISDVTSPEPMIYEDRTEEV 95
.::.|.|.|||....:||.|||..:..| .:.......|:|:||.||||
BPUM_0917___n 51 SSRQVFDAPRPMTGGAYIGGGMADLQTPPVYVPHDEQQSPLIFEDHTEEV 100
BSNT_01662___ 96 IAEARMMLNEQQADGDIDILEGDPAESIIEHANRISADMIVTGSRDQNRL 145
:|||||:|||:|.:..|:|:||:|||:|||:|..||||:||.|:|.|:||
BPUM_0917___n 101 VAEARMLLNEEQFEAAIEIVEGEPAEAIIEYAEEISADLIVMGARGQSRL 150
BSNT_01662___ 146 KKLIFGSVSEKLSAKSDIPVLIVK 169
||::|||||||||:||||||||||
BPUM_0917___n 151 KKMLFGSVSEKLSSKSDIPVLIVK 174
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