Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01649 and BPUM_0910

See DNA alignment / Visit BSNT_01649 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence pep-align/BSNT_01649___yhdW.1.24716.seq
#    -bsequence pep-align/BPUM_0910___ugpQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01649___yhdW-BPUM_0910___ugpQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01649___yhdW-BPUM_0910___ugpQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01649___yhdW
# 2: BPUM_0910___ugpQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     126/244 (51.6%)
# Similarity:   181/244 (74.2%)
# Gaps:           7/244 ( 2.9%)
# Score: 675.0
# 
#
#=======================================

BSNT_01649___      1 MYIIAHRGASGYAPENTIAAFDLAVKMNADMIELDVQLTKDRQIVVIHDD     50
                     ||||||||:|..|||||||||||||:..||.||||||||.|:.:||||||
BPUM_0910___u      1 MYIIAHRGSSSTAPENTIAAFDLAVQQGADYIELDVQLTLDQHVVVIHDD     50

BSNT_01649___     51 RVDRTTNGSGFVKDFTLEELQKLDAGSWYGPAFQGERIPTLEAVLKRYHK    100
                     .|||||||:|.||.:||::|:|||||||:...:..||||||:.:|:||.:
BPUM_0910___u     51 TVDRTTNGNGLVKSYTLDQLKKLDAGSWFDQQYTNERIPTLQEILERYSQ    100

BSNT_01649___    101 KIGLLIELKGHPS-QVGIEEEVGQLLGQFSFSINNIVQSFQFRSVQRFRE    149
                     :||:|||:| ||. |:|||:.|.:::.:|::|.:.::|||...::||.:.
BPUM_0910___u    101 RIGILIEIK-HPKRQIGIEKAVARIINRFAYSRHMMIQSFDDHALQRIKA    149

BSNT_01649___    150 LYPSIPTAVITRPNFGMLSRNQMKAFRSFANYVNIKYTRLNRLMIGSVHK    199
                     ..||:.||:|.:||...|::.::.|:.||||.:|:|.|.:||..|..:|.
BPUM_0910___u    150 FAPSLRTALIIKPNAFKLTKRKLMAYSSFANCLNMKKTMINRWWIDRIHS    199

BSNT_01649___    200 NGLNIFAWTVNNQKTAAKLQAMGVDGIVTDYPDFIIKDGKHENI    243
                     .|:::|.|||.:||||.:::...|||:|||:|.|.:|:.     
BPUM_0910___u    200 FGMDVFIWTVKDQKTADRIKKYSVDGVVTDHPPFFLKEK-----    238


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