Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01641 and BPUM_0904
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:08
# Commandline: needle
# -asequence pep-align/BSNT_01641___yhdP.1.24716.seq
# -bsequence pep-align/BPUM_0904___yhdP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01641___yhdP-BPUM_0904___yhdP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01641___yhdP-BPUM_0904___yhdP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01641___yhdP
# 2: BPUM_0904___yhdP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity: 341/444 (76.8%)
# Similarity: 400/444 (90.1%)
# Gaps: 1/444 ( 0.2%)
# Score: 1791.0
#
#
#=======================================
BSNT_01641___ 1 MDIVNLILVAVLIALTAFFVASEFAIIRIRGSRIDQLIAEGNKAAIAVKK 50
||||||::||:|||||||||||||||||:|.||||||||||||.|:|||.
BPUM_0904___y 1 MDIVNLLIVALLIALTAFFVASEFAIIRLRSSRIDQLIAEGNKTAVAVKH 50
BSNT_01641___ 51 VTTHLDEYLSACQLGITLTSIGLGVLGESTIERLLHPLFVQMNVPGSLSH 100
|||||||||||||||||:|::|:|.|||.||..:|.||||::::|.|.|.
BPUM_0904___y 51 VTTHLDEYLSACQLGITITALGIGWLGEETIAHMLAPLFVELSIPQSASS 100
BSNT_01641___ 101 VISFIFAYAIITFLHVVVGELAPKTVAIQKAEAVSMLFAKPLIWFYRIAF 150
:::||.|::|:||||||||||||||:||||||.||:|||:||:.||::.|
BPUM_0904___y 101 IVTFIIAFSIMTFLHVVVGELAPKTLAIQKAEQVSLLFARPLMIFYKVMF 150
BSNT_01641___ 151 PFIWLLNNSARLLTKAFGLETVSENELAHSEEELRIILSESYKSGEINQS 200
||||:||.|||||||||||:.|||:::|||||||||||||||||||||||
BPUM_0904___y 151 PFIWVLNGSARLLTKAFGLQQVSEHDMAHSEEELRIILSESYKSGEINQS 200
BSNT_01641___ 201 EFKYVNKIFEFDDRLAKEIMIPRTEIVSLPHDIKISEMMDIIQIEKYTRY 250
|||||||||||||||||||||||||:||.||||.|.||:.:.::||||||
BPUM_0904___y 201 EFKYVNKIFEFDDRLAKEIMIPRTEVVSFPHDITIEEMLKVTKVEKYTRY 250
BSNT_01641___ 251 PVEEGDKDNIIGVINIKEVLTACISGEVSVDSTISQFVNPIIHVIESAPI 300
|:|:|||||:|||:|||||||||||||.|...||.:||||||||||:.|:
BPUM_0904___y 251 PIEDGDKDNMIGVLNIKEVLTACISGECSTSDTIEKFVNPIIHVIETVPV 300
BSNT_01641___ 301 QDLLVKMQKERVHMAILSDEYGGTAGLVTVEDIIEEIVGEIRDEFDIDEI 350
.|||:|||:||||||||||||||||||||||||:||||||||||||||||
BPUM_0904___y 301 HDLLLKMQRERVHMAILSDEYGGTAGLVTVEDILEEIVGEIRDEFDIDEI 350
BSNT_01641___ 351 SEIRKIGEGHYILDGKVLIDQVNDLLGIHLENEEVDTIGGWFLTQKYDVE 400
:|:||:||.|||.|||||:||||.|||..|:||||||||||||||||:||
BPUM_0904___y 351 NEVRKLGEDHYIFDGKVLVDQVNLLLGTQLDNEEVDTIGGWFLTQKYEVE 400
BSNT_01641___ 401 KDDSIIEEGCEFIINEIDGHHVAYIEVKKLQEEELLETANQQEA 444
|:|:|.|:|.||||||:|||||.||||||| .|:|.|.|.:..:
BPUM_0904___y 401 KNDTIREQGYEFIINEVDGHHVVYIEVKKL-NEQLAEAAEEGAS 443
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