Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01635 and BPUM_0900

See DNA alignment / Visit BSNT_01635 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:08
# Commandline: needle
#    -asequence pep-align/BSNT_01635___yhdK.1.24716.seq
#    -bsequence pep-align/BPUM_0900___yhdK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01635___yhdK-BPUM_0900___yhdK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01635___yhdK-BPUM_0900___yhdK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01635___yhdK
# 2: BPUM_0900___yhdK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 96
# Identity:      81/96 (84.4%)
# Similarity:    92/96 (95.8%)
# Gaps:           0/96 ( 0.0%)
# Score: 439.0
# 
#
#=======================================

BSNT_01635___      1 MELVRIFKEHNVFGWISVGTAVLSLLLLNLAIISNVTFYSYQMLPFAMAA     50
                     |||||||||||||||||||||:||||:|||||||||||||:|||||||||
BPUM_0900___y      1 MELVRIFKEHNVFGWISVGTAILSLLMLNLAIISNVTFYSFQMLPFAMAA     50

BSNT_01635___     51 VPFGVVELFIKRGRTGPGLLGVILNLFVIICVYTIVSVDTNLQFGF     96
                     ||||::|||||:||||||.|||:||:|||:|||.|||:|.:||.||
BPUM_0900___y     51 VPFGIIELFIKKGRTGPGFLGVVLNIFVILCVYAIVSIDVDLQLGF     96


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