Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01622 and BPUM_0897
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:08
# Commandline: needle
# -asequence pep-align/BSNT_01622___lytE.1.24716.seq
# -bsequence pep-align/BPUM_0897___lytE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01622___lytE-BPUM_0897___lytE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01622___lytE-BPUM_0897___lytE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01622___lytE
# 2: BPUM_0897___lytE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity: 175/336 (52.1%)
# Similarity: 224/336 (66.7%)
# Gaps: 61/336 (18.2%)
# Score: 876.5
#
#
#=======================================
BSNT_01622___ 1 MKKQIITATTAVVLGSTLFAGAASAQSIKVKKGDTLWDLSRKYDTTISKI 50
||||:|||.:||:||:|||||||||||:||:|||:|..|::||.|::|||
BPUM_0897___l 1 MKKQLITAASAVLLGTTLFAGAASAQSVKVQKGDSLSVLAKKYKTSVSKI 50
BSNT_01622___ 51 KSENHLRSDIIYVGQTLSINGKSTSSKSSSSSSSSSTYKVKSGDSLWKIS 100
||:|.|:|:.|||||||.:|| |::|.::.:|.::| |||
BPUM_0897___l 51 KSDNKLKSNTIYVGQTLKVNG--TAAKKTTKTSKTTT-KVK--------- 88
BSNT_01622___ 101 KKYGMTINELKKLNGLKSDLLRVGQVLKLKGSTSSSSSSSSKVSSSSTST 150
::|:.:|
BPUM_0897___l 89 -------------------------------------------AASTAAT 95
BSNT_01622___ 151 YKVKSGDSLSKIASKYGTTVSKLKSLNGLKSDVIYVNQVLKVKGTSTSSS 200
:||..||:||||..|||.||.:|||||.||:::|.:.|.||||.| |
BPUM_0897___l 96 HKVVKGDTLSKIGKKYGMTVKELKSLNKLKTNLIKIGQKLKVKKT----S 141
BSNT_01622___ 201 KPASSSSSSSSKTSSTSLNVSKLVSDAKALVGTPYKWGGTTTSGFDCSGF 250
|...::.......|.:|||.||||:||||..||||:|||||..|||||||
BPUM_0897___l 142 KKVKTTPVKEKTVSVSSLNTSKLVADAKAHNGTPYRWGGTTPKGFDCSGF 191
BSNT_01622___ 251 IWYVLNKQTSVGRTSTAGYWSSMKSIASPSVGDFVFFTTYKSGPSHMGIY 300
:||::|||..:.|.:|.|:|.||||::||.||||||||||||||||||:|
BPUM_0897___l 192 MWYIINKQKKISRQTTEGFWGSMKSVSSPKVGDFVFFTTYKSGPSHMGVY 241
BSNT_01622___ 301 IGNNSFIHAGSDGVQISSLNNSYWKPRYLGAKRF-- 334
||||.||||.||||.||.:|:|||||.|||||.|
BPUM_0897___l 242 IGNNKFIHAASDGVTISDMNSSYWKPIYLGAKTFVK 277
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