Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01611 and BPUM_0891

See DNA alignment / Visit BSNT_01611 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:07
# Commandline: needle
#    -asequence pep-align/BSNT_01611___yhdC.1.24716.seq
#    -bsequence pep-align/BPUM_0891___yhdC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01611___yhdC-BPUM_0891___yhdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01611___yhdC-BPUM_0891___yhdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01611___yhdC
# 2: BPUM_0891___yhdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 131
# Identity:      50/131 (38.2%)
# Similarity:    76/131 (58.0%)
# Gaps:          28/131 (21.4%)
# Score: 274.5
# 
#
#=======================================

BSNT_01611___      1 ---------------------MKS---LPYTIALLFCGLIIVSMAAKGHS     26
                                          |:.   :|:..|::..|..::..|...  
BPUM_0891___y      1 MKMDRSAKHKQNIHESEINDIMQPKWWVPFVAAMVLFGSFMIHPATNA--     48

BSNT_01611___     27 TDTNESVQKWEQLAWSKIQDEYKGASFSDYAYMGRTEVNDQQTKDVFRVT     76
                       ..:.|:.||:||::.:|:||:||:.:||.|:|||:||:.|||||||||
BPUM_0891___y     49 --ATQPVENWERLAYTALQEEYEGAALNDYQYIGRTQVNEDQTKDVFRVT     96

BSNT_01611___     77 VRQKDDTFSVRAEVYFHPVTNHMISINVFRL    107
                     |::....|:..||:||||:|.|:||||||||
BPUM_0891___y     97 VKEGSALFAAHAEIYFHPITGHLISINVFRL    127


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.