Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01601 and BPUM_0884

See DNA alignment / Visit BSNT_01601 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:06
# Commandline: needle
#    -asequence pep-align/BSNT_01601___glpD.1.24716.seq
#    -bsequence pep-align/BPUM_0884___glpD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01601___glpD-BPUM_0884___glpD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01601___glpD-BPUM_0884___glpD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01601___glpD
# 2: BPUM_0884___glpD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 556
# Identity:     439/556 (79.0%)
# Similarity:   487/556 (87.6%)
# Gaps:           4/556 ( 0.7%)
# Score: 2325.0
# 
#
#=======================================

BSNT_01601___      1 MMKHQFSSLERDRMLTDMTKKTYDLFIIGGGITGAGTALDAASRGMKVAL     50
                        ..||||||::||.:||||.||:|||||||||||||||||||||:|.|
BPUM_0884___g      1 ---MTFSSLEREQMLQEMTKKPYDVFIIGGGITGAGTALDAASRGMRVGL     47

BSNT_01601___     51 SEMQDFAAGTSSRSTKLVHGGLRYLKQFEVKMVAEVGKERAIVYENGPHV    100
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0884___g     48 AEMQDFAAGTSSRSTKLVHGGLRYLKQFEVKMVAEVGKERAIVYENGPHV     97

BSNT_01601___    101 TTPEWMLLPFHKGGTFGSFTTSIGLRVYDFLAGVKKSERRSMLSAKETLQ    150
                     |||||||||.|||||||.|:|||||||||||||||.:||||||||||||.
BPUM_0884___g     98 TTPEWMLLPMHKGGTFGKFSTSIGLRVYDFLAGVKHNERRSMLSAKETLA    147

BSNT_01601___    151 KEPLVKKDGLEGGGYYVEYRTDDARLTIEVMKEAVKFGAEPVNYSKVKEL    200
                     ||||||||||:|||||||||||||||||||||||||||||.|||:||||.
BPUM_0884___g    148 KEPLVKKDGLKGGGYYVEYRTDDARLTIEVMKEAVKFGAEAVNYAKVKEF    197

BSNT_01601___    201 LYEKGKAVGVLIEDVLTKKEYKVYAKKIVNATGPWVDQLREKDHSKNGKH    250
                     :|:|||.|||:||||:|:|.|.||||||||||||||||||:|||||.|||
BPUM_0884___g    198 IYDKGKVVGVVIEDVMTQKTYDVYAKKIVNATGPWVDQLRDKDHSKEGKH    247

BSNT_01601___    251 LQHTKGIHLVFDQSVFPLKQAVYFDTPDGRMVFAIPREGKTYVGTTDTVY    300
                     |||||||||||||||||||||:||||||.|||||||||||||||||||||
BPUM_0884___g    248 LQHTKGIHLVFDQSVFPLKQAIYFDTPDKRMVFAIPREGKTYVGTTDTVY    297

BSNT_01601___    301 KEALEHPRMTTEDRDYVINSINYMFPELNITANDIESSWAGLRPLIHEEG    350
                     |:.|||||||..||||||.:|.||||:||||.||:||:||||||||||||
BPUM_0884___g    298 KKQLEHPRMTKADRDYVIKAIQYMFPDLNITENDVESNWAGLRPLIHEEG    347

BSNT_01601___    351 KDPSEISRKDEIWTSDSGLITIAGGKLTGYRKMAEHIVDLVRDRLKEEGA    400
                     |||||||||||:|||.||||||||||||||||||||||:||||.||||..
BPUM_0884___g    348 KDPSEISRKDEVWTSSSGLITIAGGKLTGYRKMAEHIVNLVRDGLKEETG    397

BSNT_01601___    401 KDFGPCKTKNMPISGGHVGGSKNLMSFVTAKTKEGIAAGLSEKDAKQLAI    450
                     |||||||||:|||||||||||||:.:||.|||.||.|.||:|..|::||.
BPUM_0884___g    398 KDFGPCKTKHMPISGGHVGGSKNMAAFVQAKTSEGAAVGLTEPIAQKLAE    447

BSNT_01601___    451 RYGSNVDRVFDRIEALKDEAAKRNIPVHILAEAEYSIEEEMTATPADFFV    500
                     :|||||..:|.|::.|:.||.||.||.::|||..|:||||:..||.|||:
BPUM_0884___g    448 KYGSNVSSLFKRVDQLQGEADKRKIPAYVLAELVYAIEEELAVTPVDFFL    497

BSNT_01601___    501 RRTGRLFFDINWVRTYKDAVIDFMNERFQWDEQAKNKHTENLNKLLHDAV    550
                     ||||.|.|:|||.:.|...|:|:|.|||.|||..|.|....|::|.|:||
BPUM_0884___g    498 RRTGSLLFNINWAKKYAQPVVDYMAERFGWDEAVKQKLQTELDQLFHEAV    547

BSNT_01601___    551 VPLEQ-    555
                     |||:. 
BPUM_0884___g    548 VPLDAE    553


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01601 and BPUM_0884

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
