Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01586 and BPUM_0871
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence pep-align/BSNT_01586___yhcS.1.24716.seq
# -bsequence pep-align/BPUM_0871___yhcS2.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01586___yhcS-BPUM_0871___yhcS2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01586___yhcS-BPUM_0871___yhcS2.aln
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#
# Aligned_sequences: 2
# 1: BSNT_01586___yhcS
# 2: BPUM_0871___yhcS2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 127/199 (63.8%)
# Similarity: 156/199 (78.4%)
# Gaps: 12/199 ( 6.0%)
# Score: 659.0
#
#
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BSNT_01586___ 1 MKKVIPLFIIAAGLVIAGYGGFKLIDTNMKTEQTLKEAKLAAEKPQEPLG 50
|||.:.|.::.||:|:.|:|.:::..|:::|.|:|.|||...
BPUM_0871___y 1 MKKWLALTVMTAGIVLLGWGIWQIASTHLQTAQSLDEAKKVV-------- 42
BSNT_01586___ 51 TKNSTDQAKNKASFKPETGQASGILEIPKINAELPIVEGTDANDLEKGVG 100
:|||..:|..|.||.|:|||||.|||:.|:|||||||||:||.||||
BPUM_0871___y 43 ---ATDQGMSKKQFAPEIGKASGILTIPKLKADLPIVEGTDADDLAKGVG 89
BSNT_01586___ 101 HYKDSYYPDENGQIVLSGHRDTVFRRTGELEKGDRLRILLSYGEFTYEIV 150
|||||||||:||||||||||||||||||||:.||:|:|.:.||||.|||.
BPUM_0871___y 90 HYKDSYYPDQNGQIVLSGHRDTVFRRTGELDIGDQLKITVPYGEFIYEIT 139
BSNT_01586___ 151 KTKIVDKDDTSIITLQHEKEELILTTCYPFSYVGNAPKRYIIYGKRVT- 198
.|||||:.||||||||:|||||||||||||.:|||||:|||||.|||:
BPUM_0871___y 140 HTKIVDQHDTSIITLQNEKEELILTTCYPFHFVGNAPERYIIYAKRVSE 188
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