Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01582 and BPUM_0866
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence pep-align/BSNT_01582___yhcN.1.24716.seq
# -bsequence pep-align/BPUM_0866___yhcN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01582___yhcN-BPUM_0866___yhcN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01582___yhcN-BPUM_0866___yhcN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01582___yhcN
# 2: BPUM_0866___yhcN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 90/194 (46.4%)
# Similarity: 125/194 (64.4%)
# Gaps: 28/194 (14.4%)
# Score: 415.5
#
#
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BSNT_01582___ 1 MLGKKQVLASVLLIP-LLMTGCGVADQGEGRRD--NNDVRNVNYRNPAND 47
|:.||.:| |:||:| |:.||||:.:||:.||. .....||.|: ||
BPUM_0866___y 1 MMNKKWML-SLLLVPALITTGCGMNNQGDERRGTMKRQYENVTYK---ND 46
BSNT_01582___ 48 DMRNVNNRDNVDNNVTDNVNNNNNRVNDDNNNDRKLEVADEAADKVTDLK 97
:|| :...|....:|::|||:|::.|.::.
BPUM_0866___y 47 NMR---------------------QDEPDVQTPQKVKVADKASELVANMP 75
BSNT_01582___ 98 EVKHADVIVAGNQAYVAVVLTNGNKGAVEDNLKKKIAKKVRSTDKNIDNV 147
|||.|:|:|.|..|:|||:|.....|.|.|:|||||:.||:|||:.||||
BPUM_0866___y 76 EVKTANVLVTGKNAFVAVMLEGDKSGNVTDDLKKKISDKVKSTDQQIDNV 125
BSNT_01582___ 148 YVSANPDFVERMQEYGKRIQKGDPIAGLFDEFIQTVQRVFPNPE 191
|||||||||:||:.|||||:.|:||:|.||||.:||:||||..:
BPUM_0866___y 126 YVSANPDFVDRMEGYGKRIRSGEPISGFFDEFTETVRRVFPESK 169
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