Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01539 and BPUM_0862

See DNA alignment / Visit BSNT_01539 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence pep-align/BSNT_01539___cspB.1.24716.seq
#    -bsequence pep-align/BPUM_0862___cspB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01539___cspB-BPUM_0862___cspB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01539___cspB-BPUM_0862___cspB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01539___cspB
# 2: BPUM_0862___cspB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 80
# Identity:      64/80 (80.0%)
# Similarity:    64/80 (80.0%)
# Gaps:          14/80 (17.5%)
# Score: 332.0
# 
#
#=======================================

BSNT_01539___      1 -------------MLEGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEG     37
                                  |||||||||||||||||||||||||||||||||||||
BPUM_0862___c      1 MNLSVKIALGGNFMLEGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEG     50

BSNT_01539___     38 FKTLEEGQAVSFEIVEGNRGPQAANVTKEA     67
                     ||||||||||||||||||||||||||.|. 
BPUM_0862___c     51 FKTLEEGQAVSFEIVEGNRGPQAANVNKA-     79


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