Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01530 and BPUM_0859
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence pep-align/BSNT_01530___yhcA.1.24716.seq
# -bsequence pep-align/BPUM_0859___yhcA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01530___yhcA-BPUM_0859___yhcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01530___yhcA-BPUM_0859___yhcA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01530___yhcA
# 2: BPUM_0859___yhcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 542
# Identity: 434/542 (80.1%)
# Similarity: 490/542 (90.4%)
# Gaps: 13/542 ( 2.4%)
# Score: 2235.0
#
#
#=======================================
BSNT_01530___ 1 -----MATGKEKNTKSPMTLLIVLMAGLFLAILNQTLLNVAMPHLMTEFG 45
.|| |.....::|||:||||||:|||||||||||||||||||.
BPUM_0859___y 1 MANQPAAT---KQGAGSLSLLIILMAGLFVAILNQTLLNVAMPHLMTEFN 47
BSNT_01530___ 46 VSATTIQWLTTGYMLVNGVLIPLSAFLITRFGQRSLFLVAMFCFTLGTLV 95
|||||||||||||||||||||||||||||||||||||||||..|||||.:
BPUM_0859___y 48 VSATTIQWLTTGYMLVNGVLIPLSAFLITRFGQRSLFLVAMISFTLGTFI 97
BSNT_01530___ 96 CGIAPNFSTMLIGRLIQAVGGGILQPLVMTTILLIFPPESRGKGMGIFGL 145
|||||||||||||||||||||||||||||||||.|||||:||||||||||
BPUM_0859___y 98 CGIAPNFSTMLIGRLIQAVGGGILQPLVMTTILFIFPPENRGKGMGIFGL 147
BSNT_01530___ 146 AMMFAPAVGPTLSGWIIEHYTWRIMFYGLVPIGAIVIIVAFFIFKNMVEP 195
||||||||||||||:|||||:|||||||||||||||||.|||:|:|:|||
BPUM_0859___y 148 AMMFAPAVGPTLSGYIIEHYSWRIMFYGLVPIGAIVIIAAFFMFRNIVEP 197
BSNT_01530___ 196 QKIKLDTLGAILSIVGFASLLYGVSEAGSDGWTDPIVLSTVIIGAIAIVA 245
:|||||:|||||||||||||||||||||||||||||||||:|:|||||:.
BPUM_0859___y 198 KKIKLDSLGAILSIVGFASLLYGVSEAGSDGWTDPIVLSTIIVGAIAIIL 247
BSNT_01530___ 246 FVVQQLRHDDPMLDFRVFKYDIFSLSSVINIIITVALYTGMFLLPIYLQN 295
|:.|||:.|:||||||||||.|||||||||||||||||||||||||||||
BPUM_0859___y 248 FIFQQLKADNPMLDFRVFKYSIFSLSSVINIIITVALYTGMFLLPIYLQN 297
BSNT_01530___ 296 LVGFTALQSGLLLLPGAIVMLIMSPISGILFDKFGPRPLAIIGLLVTVVT 345
||||||||||||:||||:.||||||||||||||||||||||:|:|:||||
BPUM_0859___y 298 LVGFTALQSGLLMLPGALAMLIMSPISGILFDKFGPRPLAIVGMLITVVT 347
BSNT_01530___ 346 TYQYTQLTIDTPYTHIMLIYSIRAFGMSLLMMPVMTAGMNQLPARLNSHG 395
|:::|:|||||.|:||:|:|::|||||||||||||||||||||..|||||
BPUM_0859___y 348 TFEFTRLTIDTSYSHIVLMYAVRAFGMSLLMMPVMTAGMNQLPQHLNSHG 397
BSNT_01530___ 396 TAMSNTLRQISGSIGTSLITTIYTNRTTFHYSQIADKTSTADPNFLHAFQ 445
||||||||||||||||||||||||||||||||.:||:|:||||.|:::||
BPUM_0859___y 398 TAMSNTLRQISGSIGTSLITTIYTNRTTFHYSNMADQTNTADPFFMNSFQ 447
BSNT_01530___ 446 NAVSNLMVNMNVSYDTAKTYVYSHIYKHASLDSNVMGINDAFMWATLFCV 495
.||||:|.:|.::.:.|:.||.:.::..|.:||||||||||:||.||||.
BPUM_0859___y 448 AAVSNVMHHMGMTAEAAQKYVSTQLFTKAQVDSNVMGINDAYMWVTLFCA 497
BSNT_01530___ 496 AGLILSIFLRDVRKDKLRK---KKKEELSLLPAPKEAKES-- 532
||:|||:|||||||||.|| .||:|::||||||||.:.
BPUM_0859___y 498 AGVILSLFLRDVRKDKKRKDQQHKKQEMTLLPAPKEANQDAR 539
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