Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01318 and BPUM_0734

See DNA alignment / Visit BSNT_01318 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence pep-align/BSNT_01318___yfkK.1.24716.seq
#    -bsequence pep-align/BPUM_0734___yfkK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01318___yfkK-BPUM_0734___yfkK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01318___yfkK-BPUM_0734___yfkK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01318___yfkK
# 2: BPUM_0734___yfkK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 71
# Identity:      49/71 (69.0%)
# Similarity:    57/71 (80.3%)
# Gaps:           0/71 ( 0.0%)
# Score: 246.0
# 
#
#=======================================

BSNT_01318___      1 MSSPNTETLTQMIEEISQKLNMLNVGVIKAEDFSDEKIEDLTYLHSMVMK     50
                     ||......:.|:||:|||||||||:|||||||||.:|.||:.:||.||||
BPUM_0734___y      1 MSEQKAAEVNQLIEDISQKLNMLNIGVIKAEDFSPDKYEDIEFLHQMVMK     50

BSNT_01318___     51 KESFSPSEMQAIAQELASLRK     71
                     |.|||||||||||.||.:|||
BPUM_0734___y     51 KSSFSPSEMQAIASELKNLRK     71


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.