Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01389 and BPUM_0713
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence pep-align/BSNT_01389___padR.1.24716.seq
# -bsequence pep-align/BPUM_0713___padR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01389___padR-BPUM_0713___padR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01389___padR-BPUM_0713___padR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01389___padR
# 2: BPUM_0713___padR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 114/188 (60.6%)
# Similarity: 136/188 (72.3%)
# Gaps: 9/188 ( 4.8%)
# Score: 564.5
#
#
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BSNT_01389___ 1 MRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTD 50
||||||||||||.:.||:|||||.:||:.|||||||||||||||||:|||
BPUM_0713___p 1 MRVLKYAILGLLDQCELTGYDITKHFKDSLGQFWSAKHSQIYPELKRLTD 50
BSNT_01389___ 51 EGFITFRTTIQGTKLEKKMYTLTDNGKQELHAWLIRHQPIPETVKDEFML 100
||||.|...|||.|||||:|.:|:.|:..||.||....|||||.||||||
BPUM_0713___p 51 EGFIEFDVRIQGKKLEKKVYQITEAGQAALHQWLRTKDPIPETTKDEFML 100
BSNT_01389___ 101 KAYFISSLSRQEASDLFTDQLQKRKAKLSDLQESYEKLMASAK----PMS 146
|.:||||:.::||:||||.||.:|..|:..|: :||:|..: ..|
BPUM_0713___p 101 KTFFISSMDKKEAADLFTHQLLERTKKVDMLK---QKLLALTEEDPGAES 147
BSNT_01389___ 147 FSSPDFGHYLVLTKALEREKNYVSWLESILAMIDKD-- 182
..|..||||||||:|:||||.||.|||..|..||..
BPUM_0713___p 148 LYSAQFGHYLVLTRAIEREKGYVRWLEQTLKRIDSSAL 185
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