Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01389 and BPUM_0713

See DNA alignment / Visit BSNT_01389 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence pep-align/BSNT_01389___padR.1.24716.seq
#    -bsequence pep-align/BPUM_0713___padR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01389___padR-BPUM_0713___padR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01389___padR-BPUM_0713___padR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01389___padR
# 2: BPUM_0713___padR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity:     114/188 (60.6%)
# Similarity:   136/188 (72.3%)
# Gaps:           9/188 ( 4.8%)
# Score: 564.5
# 
#
#=======================================

BSNT_01389___      1 MRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTD     50
                     ||||||||||||.:.||:|||||.:||:.|||||||||||||||||:|||
BPUM_0713___p      1 MRVLKYAILGLLDQCELTGYDITKHFKDSLGQFWSAKHSQIYPELKRLTD     50

BSNT_01389___     51 EGFITFRTTIQGTKLEKKMYTLTDNGKQELHAWLIRHQPIPETVKDEFML    100
                     ||||.|...|||.|||||:|.:|:.|:..||.||....|||||.||||||
BPUM_0713___p     51 EGFIEFDVRIQGKKLEKKVYQITEAGQAALHQWLRTKDPIPETTKDEFML    100

BSNT_01389___    101 KAYFISSLSRQEASDLFTDQLQKRKAKLSDLQESYEKLMASAK----PMS    146
                     |.:||||:.::||:||||.||.:|..|:..|:   :||:|..:    ..|
BPUM_0713___p    101 KTFFISSMDKKEAADLFTHQLLERTKKVDMLK---QKLLALTEEDPGAES    147

BSNT_01389___    147 FSSPDFGHYLVLTKALEREKNYVSWLESILAMIDKD--    182
                     ..|..||||||||:|:||||.||.|||..|..||..  
BPUM_0713___p    148 LYSAQFGHYLVLTRAIEREKGYVRWLEQTLKRIDSSAL    185


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