Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01274 and BPUM_0707
See
DNA alignment /
Visit
BSNT_01274 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence pep-align/BSNT_01274___citS.1.24716.seq
# -bsequence pep-align/BPUM_0707___citS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01274___citS-BPUM_0707___citS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01274___citS-BPUM_0707___citS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01274___citS
# 2: BPUM_0707___citS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity: 306/558 (54.8%)
# Similarity: 389/558 (69.7%)
# Gaps: 30/558 ( 5.4%)
# Score: 1467.5
#
#
#=======================================
BSNT_01274___ 1 ------------MVKKRFHFSLQTKIMGLIAALLVFVIGVLTITLAVQHT 38
|.|:: .:|||||:|||..||:.||.:|||......|
BPUM_0707___c 1 MKLVELGVVAVRMGKRK--VTLQTKILGLIIGLLLVVIALLTICFGFLQT 48
BSNT_01274___ 39 QGERRQAEQLAVQTARTISYMPPVKELIERKGGHAAETQEVIEQMKEQTG 88
...:|||||||||||||||||||:|..:........|.|.|:||||:|..
BPUM_0707___c 49 SERQRQAEQLAVQTARTISYMPPIKTSVATSSVSQDEEQAVLEQMKDQVK 98
BSNT_01274___ 89 AFAIYVLDEKGDIRSASGKSGLKK---LERSRE-ILFGGSHVSETKADGR 134
|.||::.::||.:...:....:.| :.|.|. :||||:.:|...::|.
BPUM_0707___c 99 AHAIFITNQKGKVLFHTNHENVGKTISVFRGRSTLLFGGTSISAGDSNGE 148
BSNT_01274___ 135 RVIRGSAPIIKEQKGYSQVIGSVSVDFLQTETEQSIKKHLRNLSVIAVLV 184
.|:||||||:||...:.::||:|:|:||:.|.:|:....|..||.||:||
BPUM_0707___c 149 TVVRGSAPIMKETGKHEEIIGTVTVEFLKKEIDQATAHQLFKLSYIALLV 198
BSNT_01274___ 185 LLLGFIGAAVLAKSIRKDTLGLEPHEIAALYRERNAMLFAIREGIIATNR 234
||.|..||..|.:|||||||||||||||:|:|||.|||.||:|||||.:|
BPUM_0707___c 199 LLPGIFGAIFLTRSIRKDTLGLEPHEIASLFREREAMLLAIKEGIIAFDR 248
BSNT_01274___ 235 EGVVTMMNVSAAEMLKLPEPVIHLPIDDVMPGAGLMSVLEQGEMLPNQEV 284
:|.:||||.||.:||::... :.|.||.|:|.|.|:..|::..:.||.|.
BPUM_0707___c 249 KGAMTMMNTSAEQMLRVSSE-LPLHIDQVLPKANLLFYLKEETIEPNIET 297
BSNT_01274___ 285 SVNDQVFIINTKVMNQGGQVYGIVVSFREKTELKKLIDTLTEVRKYSEDL 334
.||::.:::|.|.:.|...|:|.:|||||||||.||:||||||.:|||||
BPUM_0707___c 298 VVNNKTYVLNVKKVVQDNHVFGGIVSFREKTELTKLLDTLTEVSQYSEDL 347
BSNT_01274___ 335 RAQTHEFSNKLYAILGLLELGEYDEAIDLIKEEYAMQNEQHDLLFHNIHS 384
||||||||||||||||||||.:.|||||||||||.:||.|||||...|.|
BPUM_0707___c 348 RAQTHEFSNKLYAILGLLELKQVDEAIDLIKEEYTLQNRQHDLLMKQIRS 397
BSNT_01274___ 385 QQVQAILLGKISKASEKKVKLVIDENSSLAPLPAHIGLSHLITIIGNLID 434
.::||||||||.|||||||...|||||||.|||||:.|||.|||||||:|
BPUM_0707___c 398 PKIQAILLGKIGKASEKKVHFHIDENSSLEPLPAHLSLSHFITIIGNLVD 447
BSNT_01274___ 435 NAFEAVAEQSVKEVLFFITDMGHDIVIEVSDTGPGVPPEKIEAVFERGYS 484
||||||..:..:||..||||:|.||:|||||:|.||..|::..:|.||:|
BPUM_0707___c 448 NAFEAVLNKETREVSLFITDIGFDIIIEVSDSGDGVGEEELSHIFTRGHS 497
BSNT_01274___ 485 SKGMRRGYGLANVKDSVRELGGWIELANQKTGGAVFTVFIPKEKQRGNPF 534
|||..|||||||||:.:.|||||||:.|||.|||:||.:||| ..:|.
BPUM_0707___c 498 SKGEGRGYGLANVKEVLDELGGWIEVTNQKEGGAIFTAYIPK-GTKGE-- 544
BSNT_01274___ 535 DSHRDCGG 542
BPUM_0707___c 544 -------- 544
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.