Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02893 and BPUM_0666
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:27
# Commandline: needle
# -asequence pep-align/BSNT_02893.1.24716.seq
# -bsequence pep-align/BPUM_0666.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02893-BPUM_0666.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02893-BPUM_0666.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02893
# 2: BPUM_0666
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 230
# Identity: 48/230 (20.9%)
# Similarity: 92/230 (40.0%)
# Gaps: 76/230 (33.0%)
# Score: 208.5
#
#
#=======================================
BSNT_02893 0 -------------------------------------------------- 0
BPUM_0666 1 MSDQINIFLKSHFPDLVLTPPLFYEWPFGLRFEVADWSLGEKSVVLEKAG 50
BSNT_02893 1 -MNLKRFRFVYEQISTIFNQLFEQNDDIFLVTNMYKHKTNDKFIKKLKVY 49
..||..|:. |:..|||..||::|....::...:||.||
BPUM_0666 51 DRALKIVRYA-----------FDPEDDILFVTDVYTQHEHELMKQKLLVY 89
BSNT_02893 50 QPFLKCKNYLNQIQVKTYSY-PFEIDEAEEYEMQQFSLLCKPRDLHVAEL 98
|.::: :....:::.:..:| ..|:| |...:::|:|.|:.:|:.:..|
BPUM_0666 90 QKYVR-RQVRKRLRHELLTYVRSELD--EPLTLERFTLTCQLQDIRLRPL 136
BSNT_02893 99 LKAASNEDFPLKPRFGGYSIDYPDVFFVNITKDIIFFIYDDRGCEVIALD 148
|.|...|||....:.....:.| :::.:|::|.:||.:||||||::||.|
BPUM_0666 137 LHAICQEDFYAPNQILNGKLGY-EIYLINLSKQMIFHLYDDRGCDLIAAD 185
BSNT_02893 149 FKRIRPLNEKYHNWVEEYKYI--------- 169
.:|::|:.|...:|:.:|...
BPUM_0666 186 AERLQPVYEGLQHWLLDYDRPQIDQLFTEK 215
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