Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00851 and BPUM_0573
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:36
# Commandline: needle
# -asequence pep-align/BSNT_00851___yddD.1.24716.seq
# -bsequence pep-align/BPUM_0573___yddD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00851___yddD-BPUM_0573___yddD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00851___yddD-BPUM_0573___yddD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00851___yddD
# 2: BPUM_0573___yddD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 176
# Identity: 95/176 (54.0%)
# Similarity: 120/176 (68.2%)
# Gaps: 23/176 (13.1%)
# Score: 482.0
#
#
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BSNT_00851___ 1 MGRLVFNYRKAMREPKKIQQLTENYSLPFAVELIPAINYFIFVGLCFGFW 50
|.|:|||||||||||||||::|:|:|||||:||||.|||||||.:.|||:
BPUM_0573___y 1 MTRMVFNYRKAMREPKKIQKITDNFSLPFAIELIPMINYFIFVAISFGFF 50
BSNT_00851___ 51 YGVRMIFPHAFDNSFIIVIFGIPIFFTMLVTKIKPEGKNIYLYFIDFAKY 100
.|||.|||.||:|:|:|||||||:..|:.|:|:|||||||||||....||
BPUM_0573___y 51 LGVRKIFPSAFENTFLIVIFGIPLALTIFVSKVKPEGKNIYLYFWGVFKY 100
BSNT_00851___ 101 YFFIKLPQKKFCNDRRVDLSNEKQIEFRKLVKVVDYSDETKNAYEGNTQE 150
...||.|:|||||||.:...|:|:|.|:.| .|.:|...|||.|
BPUM_0573___y 101 LIMIKFPKKKFCNDRDIRFINQKEIRFKPL-------KEVRNFESGNTNE 143
BSNT_00851___ 151 FAVNKNGRRVGVLPNKKQFDSYAK-- 174
..: :||| :.:
BPUM_0573___y 144 EYI-------------QQFD-FDEIR 155
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