Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01087 and BPUM_0545
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:42
# Commandline: needle
# -asequence pep-align/BSNT_01087___yeaC.1.24716.seq
# -bsequence pep-align/BPUM_0545___yeaC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01087___yeaC-BPUM_0545___yeaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01087___yeaC-BPUM_0545___yeaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01087___yeaC
# 2: BPUM_0545___yeaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity: 239/320 (74.7%)
# Similarity: 274/320 (85.6%)
# Gaps: 0/320 ( 0.0%)
# Score: 1217.0
#
#
#=======================================
BSNT_01087___ 1 MAYQEDLHPLLGKAVEHINRVMVGKRDIAILSLAALLAKGHVLLEDVPGV 50
||:.|.:|..|.|.|::||:|||||:|||||||.|:||||||||||||||
BPUM_0545___y 1 MAFDEPMHSDLQKIVDNINKVMVGKKDIAILSLVAILAKGHVLLEDVPGV 50
BSNT_01087___ 51 GKTMMVRALAKSIGADFKRIQFTPDLLPSDVTGVSIYNAKTMEFEYRPGP 100
||||||||||||||.:||||||||||||||||||||||.||.|||:|.||
BPUM_0545___y 51 GKTMMVRALAKSIGCEFKRIQFTPDLLPSDVTGVSIYNKKTNEFEFRQGP 100
BSNT_01087___ 101 IMGNIVLADEINRTSPKTQSALLEAMEEGSVTVDGHTMQLAAPFFVMATQ 150
|||.|:|||||||||||||||||||||||||||||.||.||.||||||||
BPUM_0545___y 101 IMGQIILADEINRTSPKTQSALLEAMEEGSVTVDGETMLLADPFFVMATQ 150
BSNT_01087___ 151 NPVEYEGTYPLPEAQLDRFLFKLRMGYPSFNEELDVLSLQEKSHPIETLE 200
|||||||||||||||:|||||||:||||:..|||:||:||||..||:||:
BPUM_0545___y 151 NPVEYEGTYPLPEAQMDRFLFKLQMGYPTMLEELEVLNLQEKQSPIDTLQ 200
BSNT_01087___ 201 PVIAKEDFIFLQREVQNVRADDSIKEYIVEIVQKTRQHPSVQLGVSPRGS 250
.|:.|:....||:.||.:..|.|||||||||.|.|||||||.||||||||
BPUM_0545___y 201 AVMTKDHLHALQQAVQTIHVDASIKEYIVEIAQATRQHPSVYLGVSPRGS 250
BSNT_01087___ 251 IALMKAAQAYALLHHRDYVIPDDIQYLAPFTLPHRMMLHPEAKFEGIQAE 300
|||||||||||||:.||||||||:|||..:||||||:|..||.:||.:||
BPUM_0545___y 251 IALMKAAQAYALLNRRDYVIPDDVQYLVSYTLPHRMILTSEATYEGKKAE 300
BSNT_01087___ 301 AIVREIMSAVKVPVQRSSVR 320
.::|:::..:.||||:|..:
BPUM_0545___y 301 TLLRQMLEQIGVPVQKSMTQ 320
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