Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01082 and BPUM_0542

See DNA alignment / Visit BSNT_01082 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence pep-align/BSNT_01082___cotA.1.24716.seq
#    -bsequence pep-align/BPUM_0542___cotA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01082___cotA-BPUM_0542___cotA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01082___cotA-BPUM_0542___cotA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01082___cotA
# 2: BPUM_0542___cotA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 519
# Identity:     352/519 (67.8%)
# Similarity:   407/519 (78.4%)
# Gaps:          16/519 ( 3.1%)
# Score: 1926.5
# 
#
#=======================================

BSNT_01082___      1 MTLEKFVDALPIPDTLKPVQQSKEKTYYEVTMEECTHQLHRDLPPTRLWG     50
                     |.||||||.||||:..:||:::..:||||:.|||...::|||||||:||.
BPUM_0542___c      1 MNLEKFVDELPIPEVAEPVKKNPRQTYYEIAMEEVFLKVHRDLPPTKLWT     50

BSNT_01082___     51 YNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEV    100
                     |||..|||||...|||.|.|||||.||..||||:|||||  :..|:||||
BPUM_0542___c     51 YNGSLPGPTIHANRNEKVKVKWMNKLPLKHFLPVDHTIH--EGHHDEPEV     98

BSNT_01082___    101 KTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAIL    150
                     ||||||||||||..||||||||||:|||.|||:|:||||.|||.|:...|
BPUM_0542___c     99 KTVVHLHGGVTPASSDGYPEAWFSRDFEATGPFFEREVYEYPNHQQACTL    148

BSNT_01082___    151 WYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTI    200
                     ||||||||||||||||||.|.|:|.|..||.|:||.||||:||:|.|||.
BPUM_0542___c    149 WYHDHAMALTRLNVYAGLAGFYLISDAFEKSLELPKDEYDIPLMIMDRTF    198

BSNT_01082___    201 NEDGSLFYPSAPEN-PSPS-LPNPSIVPAFCGETILVNGKVWPYLEVEPR    248
                     .|||:|||||.|.| |..| ||:|||||.|||||||||||||||||||||
BPUM_0542___c    199 QEDGALFYPSRPNNTPEDSDLPDPSIVPFFCGETILVNGKVWPYLEVEPR    248

BSNT_01082___    249 KYRFRVINASNTRTYNLSLDNGGEFIQIGSDGGLLPRSVKLNSFSLAPAE    298
                     |||||::||||||||.|.|||....:|||||||.|||.|...||::||||
BPUM_0542___c    249 KYRFRILNASNTRTYELHLDNDATILQIGSDGGFLPRPVHHQSFTIAPAE    298

BSNT_01082___    299 RYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDE    348
                     |:|:||||:|||.::|.|.|.||||.:||||||||||||:||:||    :
BPUM_0542___c    299 RFDVIIDFSAYENKTITLKNKAGCGQEVNPETDANIMQFKVTRPL----K    344

BSNT_01082___    349 SRKPKYL----ASYPSVQHERIQNIRTLKLAGTQDEYGRPVLLLNNKRWH    394
                     .|.||.|    ...|.::..|....|||.|.||||:||||:|||:|..|:
BPUM_0542___c    345 GRAPKTLRPIFKPLPPLRPSRADQERTLTLTGTQDKYGRPILLLDNHFWN    394

BSNT_01082___    395 DPVTEAPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQES    444
                     |||||.|::|:.|:|||:||||||||||||||.|||:||||||...||.:
BPUM_0542___c    395 DPVTENPRLGSVEVWSIVNPTRGTHPIHLHLVQFRVIDRRPFDTEVYQST    444

BSNT_01082___    445 GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHI    494
                     |::.||||...||..|:|:|||||||||||:||.|.|.||||||||||||
BPUM_0542___c    445 GDIVYTGPNEAPPLHEQGYKDTIQAHAGEVIRIIARFVPYSGRYVWHCHI    494

BSNT_01082___    495 LEHEDYDMMRPMDITDPHK    513
                     ||||||||||||||.    
BPUM_0542___c    495 LEHEDYDMMRPMDII----    509


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