Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01040 and BPUM_0528

See DNA alignment / Visit BSNT_01040 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:41
# Commandline: needle
#    -asequence pep-align/BSNT_01040___rex.1.24716.seq
#    -bsequence pep-align/BPUM_0528___rex.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01040___rex-BPUM_0528___rex.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01040___rex-BPUM_0528___rex.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01040___rex
# 2: BPUM_0528___rex
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity:     194/218 (89.0%)
# Similarity:   206/218 (94.5%)
# Gaps:           4/218 ( 1.8%)
# Score: 989.0
# 
#
#=======================================

BSNT_01040___      1 MNKDQSKIPQATAKRLPLYYRFLKNLHASGKQRVSSAELSDAVKVDSATI     50
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0528___r      1 MNIDQSKIPQATAKRLPLYYRFLKNLHASGKQRVSSAELSDAVKVDSATI     50

BSNT_01040___     51 RRDFSYFGALGKKGYGYNVDYLLSFFRKTLDQDEMTDVILIGVGNLGTAF    100
                     |||||||||||||||||||||||:||||||||||||:|:|||||||||||
BPUM_0528___r     51 RRDFSYFGALGKKGYGYNVDYLLTFFRKTLDQDEMTNVMLIGVGNLGTAF    100

BSNT_01040___    101 LHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVK---DES    147
                     |||||.||||||||||||:||||||:|:||||||:||.||:||:   |..
BPUM_0528___r    101 LHYNFIKNNNTKISMAFDVNESKIGSEIGGVPVYDLDKLEEHVQEVGDIP    150

BSNT_01040___    148 VAILTVPAVAAQSITDRLVALGIKGILNFTPARLNVPEHIRIHHIDLAVE    197
                     ||||||||||||.|||||:|||||||||||||||||||||||||||||||
BPUM_0528___r    151 VAILTVPAVAAQPITDRLIALGIKGILNFTPARLNVPEHIRIHHIDLAVE    200

BSNT_01040___    198 LQSLVYFLKHYSVLEEIE    215
                     ||||||||||||:.:|. 
BPUM_0528___r    201 LQSLVYFLKHYSITQED-    217


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