Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01253 and BPUM_0510

See DNA alignment / Visit BSNT_01253 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence pep-align/BSNT_01253___yfmS.1.24716.seq
#    -bsequence pep-align/BPUM_0510.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01253___yfmS-BPUM_0510.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01253___yfmS-BPUM_0510.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01253___yfmS
# 2: BPUM_0510
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity:      90/287 (31.4%)
# Similarity:   146/287 (50.9%)
# Gaps:          12/287 ( 4.2%)
# Score: 405.0
# 
#
#=======================================

BSNT_01253___      1 MELTINTEKETADILDAFIKVAPYLNSLVQDDITIGIYDTEKLLVNIPAK     50
                                .:.||.::::|..:..::.:.|..||.||||:|...|:.
BPUM_0510          1 -----------MNRLDYYVEMAQLVRKVLDESILFGITDTEKVLCYYPSN     39

BSNT_01253___     51 TFSLNVKAGDPLQEGDIITDAIRSNQKKTSMVPKELFGFPLIARAIPLHD    100
                     |....:|.||||...|.........|:....:|:.|:|:.:..:..|:.|
BPUM_0510         40 TIDFGMKVGDPLNPEDQNVATTLRGQEYDGHLPESLYGYEIAVKGYPIFD     89

BSNT_01253___    101 ENGRVIGGVGLGTSLEESSKLHDVAESLSAVVEQTAAAISDISESINGFS    150
                     ||.:|||...:..|.....||....|.::.|.::..:.|..|:......:
BPUM_0510         90 ENRKVIGSFLVAFSHHREKKLSGYMEHINGVAKELQSGIEQIAAHSQELA    139

BSNT_01253___    151 TQMSGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARAGE    200
                     .....||.||.:..|.:..|.::..|:.||:.|:||||||||||||||||
BPUM_0510        140 ATSLEISEQAGRAEEKSANIEEVVKTIGGIARQTNLLGLNAAIEAARAGE    189

BSNT_01253___    201 SGKGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQH    250
                     :||||:|||||:|||:..|||....|:...|:|...:..|.|:|..|:..
BPUM_0510        190 NGKGFAVVADEVRKLSDGSKEAAETINTFLKEIQDSIGTLSENISQISSS    239

BSNT_01253___    251 TDGQAAAVEQISATMQEISGSAQHLAKMAEKALEEE-    286
                     |:.||..|...:..::.::...:.:....|:..::. 
BPUM_0510        240 TNEQAKQVTDFTKIIESLNEFKEEMNHFIEEIRQDTK    276


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