Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03914 and BPUM_0462

See DNA alignment / Visit BSNT_03914 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:24
# Commandline: needle
#    -asequence pep-align/BSNT_03914___yraB.1.24716.seq
#    -bsequence pep-align/BPUM_0462___yraB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03914___yraB-BPUM_0462___yraB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03914___yraB-BPUM_0462___yraB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03914___yraB
# 2: BPUM_0462___yraB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:      83/141 (58.9%)
# Similarity:   104/141 (73.8%)
# Gaps:           9/141 ( 6.4%)
# Score: 422.0
# 
#
#=======================================

BSNT_03914___      1 MNIAQVAKQFGLTAATLRYYERVGLIPPVKRKNSGIRDYDEEDIKWIEFI     50
                     |.|||.|||..|:.|||||||.:|||.|::|..:|:|||.||||:|||||
BPUM_0462___y      1 MKIAQAAKQLDLSTATLRYYENIGLIRPIRRDENGVRDYAEEDIQWIEFI     50

BSNT_03914___     51 KCMRNAGLSIEALIEYTTLFTEG-DRTVEARKNILADERQRLIEKRKEID     99
                     ||||||||||:||.|||.||.|| |.|:.:||:||.:||:||:||:|||:
BPUM_0462___y     51 KCMRNAGLSIDALREYTALFIEGEDHTLSSRKSILVNERERLVEKQKEIE    100

BSNT_03914___    100 ETIKRLDTKIKDYDGKLRENEAKLKSRPKTESLHGSVEQRR    140
                     |||||||.||:.|:..:...|.||..:.||.|:        
BPUM_0462___y    101 ETIKRLDYKIESYEDIIHSYEQKLVHQLKTNSI--------    133


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